RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 FAXCQ5TGI0 409 aa16.24■□□□□ 0.19
CIRBP-240ENST00000592815 CDCP2Q5VXM1 449 aa16.24■□□□□ 0.19
CIRBP-240ENST00000592815 E4F1Q66K89 784 aaPredicted RBP16.24■□□□□ 0.19
CIRBP-240ENST00000592815 CAVIN1Q6NZI2 390 aaKnown RBP16.24■□□□□ 0.19
CIRBP-240ENST00000592815 ZCCHC8Q6NZY4 707 aaKnown RBP16.24■□□□□ 0.19
CIRBP-240ENST00000592815 RFX8Q6ZV50 586 aa16.24■□□□□ 0.19
CIRBP-240ENST00000592815 CAMK1DQ8IU85 385 aa16.24■□□□□ 0.19
CIRBP-240ENST00000592815 RBFAQ8N0V3 343 aa16.24■□□□□ 0.19
CIRBP-240ENST00000592815 TP53I13Q8NBR0 393 aaPredicted RBP16.24■□□□□ 0.19
CIRBP-240ENST00000592815 ZNF641Q96N77 438 aaPredicted RBP16.24■□□□□ 0.19
CIRBP-240ENST00000592815 EIF3CQ99613 913 aaKnown RBP16.24■□□□□ 0.19
CIRBP-240ENST00000592815 IL12RB2Q99665 862 aa16.24■□□□□ 0.19
CIRBP-240ENST00000592815 TCEAL2Q9H3H9 227 aaPredicted RBP16.24■□□□□ 0.19
CIRBP-240ENST00000592815 PCDH12Q9NPG4 1184 aa16.24■□□□□ 0.19
CIRBP-240ENST00000592815 SPASTQ9UBP0 616 aa16.24■□□□□ 0.19
CIRBP-240ENST00000592815 COQ6Q9Y2Z9 468 aa16.24■□□□□ 0.19
CIRBP-240ENST00000592815 A0A1B0GTH6 734 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 DFFAO00273 331 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 TPP1O14773 563 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 BRINP1O60477 761 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 GCATO75600 419 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 GP1BAP07359 652 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 ERCC2P18074 760 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 ITPKBP27987 946 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 EIF2S3P41091 472 aaKnown RBP16.23■□□□□ 0.19
CIRBP-240ENST00000592815 PRKCIP41743 596 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 ADKP55263 362 aaKnown RBP16.23■□□□□ 0.19
CIRBP-240ENST00000592815 CDKN3Q16667 212 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 PRRT3Q5FWE3 981 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 CFAP58Q5T655 872 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 SRLQ86TD4 932 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 PHACTR4Q8IZ21 702 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 TSEN2Q8NCE0 465 aaKnown RBP16.23■□□□□ 0.19
CIRBP-240ENST00000592815 IFI44Q8TCB0 444 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 MAPK15Q8TD08 544 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 ZNF653Q96CK0 615 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 CRELD1Q96HD1 420 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 SLC13A1Q9BZW2 595 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 NCKIPSDQ9NZQ3 722 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 MYO1AQ9UBC5 1043 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 APOBEC3BQ9UH17 382 aaKnown RBP16.23■□□□□ 0.19
CIRBP-240ENST00000592815 SALL4Q9UJQ4 1053 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 PNMA8BQ9ULN7 279 aaPredicted RBP16.23■□□□□ 0.19
CIRBP-240ENST00000592815 PCDHB1Q9Y5F3 818 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 ASXL3Q9C0F0 2248 aa16.23■□□□□ 0.19
CIRBP-240ENST00000592815 TSPAN11A1L157 253 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 TOR1BO14657 336 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 RIOK3O14730 519 aaKnown RBP16.22■□□□□ 0.19
CIRBP-240ENST00000592815 SERPINC1P01008 464 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 PRKCGP05129 697 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 ABCG1P45844 678 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 RGRP47804 291 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 CSNK1DP48730 415 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 PPARDQ03181 441 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 NR1I3Q14994 352 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 LRRC14Q15048 493 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 IRF4Q15306 451 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 WSCD2Q2TBF2 565 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 AFMIDQ63HM1 303 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 ERAP2Q6P179 960 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 BRAT1Q6PJG6 821 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 LRRC69Q6ZNQ3 347 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 CYP4V2Q6ZWL3 525 aaPredicted RBP16.22■□□□□ 0.19
CIRBP-240ENST00000592815 EFL1Q7Z2Z2 1120 aaKnown RBP16.22■□□□□ 0.19
CIRBP-240ENST00000592815 ARHGAP12Q8IWW6 846 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 FNIP1Q8TF40 1166 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 FGF11Q92914 225 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 DEPDC7Q96QD5 511 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 TUBGCP5Q96RT8 1024 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 EDEM3Q9BZQ6 932 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 SP110Q9HB58 689 aa16.22■□□□□ 0.19
CIRBP-240ENST00000592815 CWC15Q9P013 229 aaKnown RBP16.22■□□□□ 0.19
CIRBP-240ENST00000592815 YY2O15391 372 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 RRP8O43159 456 aaKnown RBP16.21■□□□□ 0.19
CIRBP-240ENST00000592815 LZTS3O60299 673 aaPredicted RBP16.21■□□□□ 0.19
CIRBP-240ENST00000592815 USP12O75317 370 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 CSO75390 466 aaKnown RBP16.21■□□□□ 0.19
CIRBP-240ENST00000592815 LRCH4O75427 683 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 ANXA6P08133 673 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 C6P13671 934 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 ACTN2P35609 894 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 HCAR3P49019 387 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 LIG3P49916 1009 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 COL9A2Q14055 689 aaPredicted RBP16.21■□□□□ 0.19
CIRBP-240ENST00000592815 IQCB1Q15051 598 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 NR0B2Q15466 257 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 SOWAHCQ53LP3 525 aaPredicted RBP16.21■□□□□ 0.19
CIRBP-240ENST00000592815 GUSBP11Q6P575 273 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 MACC1Q6ZN28 852 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 ARHGAP36Q6ZRI8 547 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 ZSWIM9Q86XI8 627 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 PSTKQ8IV42 348 aaKnown RBP16.21■□□□□ 0.19
CIRBP-240ENST00000592815 NPWQ8N729 165 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 PAF1Q8N7H5 531 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 LRRC61Q9BV99 259 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 CINPQ9BW66 212 aaPredicted RBP16.21■□□□□ 0.19
CIRBP-240ENST00000592815 ATP13A3Q9H7F0 1226 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 MRPL47Q9HD33 250 aaKnown RBP16.21■□□□□ 0.19
CIRBP-240ENST00000592815 SCINQ9Y6U3 715 aa16.21■□□□□ 0.19
CIRBP-240ENST00000592815 TMEM110-MUSTN1A8MSY1 372 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms