RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 PFN3P60673 137 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 SEMG2Q02383 582 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 SLC10A7Q0GE19 358 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 PDE1CQ14123 709 aaPredicted RBP14.01□□□□□ -0.17
APOC1-208ENST00000592535 TRIM14Q14142 442 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 RFTN1Q14699 578 aaPredicted RBP14.01□□□□□ -0.17
APOC1-208ENST00000592535 UGP2Q16851 508 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 PROX2Q3B8N5 592 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 TMEM52BQ4KMG9 183 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 CFAP58Q5T655 872 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 VSTM4Q8IW00 320 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 OR8K1Q8NGG5 319 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 HCAR2Q8TDS4 363 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 CENPTQ96BT3 561 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 IFT43Q96FT9 208 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 ZNF641Q96N77 438 aaPredicted RBP14.01□□□□□ -0.17
APOC1-208ENST00000592535 TUBGCP5Q96RT8 1024 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 DNAJC7Q99615 494 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 PCDH12Q9NPG4 1184 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 CTTNBP2NLQ9P2B4 639 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 COQ6Q9Y2Z9 468 aa14.01□□□□□ -0.17
APOC1-208ENST00000592535 PEX11BO96011 259 aa14□□□□□ -0.17
APOC1-208ENST00000592535 CD48P09326 243 aa14□□□□□ -0.17
APOC1-208ENST00000592535 GIMD1P0DJR0 217 aa14□□□□□ -0.17
APOC1-208ENST00000592535 SERPINA4P29622 427 aa14□□□□□ -0.17
APOC1-208ENST00000592535 GJC1P36383 396 aa14□□□□□ -0.17
APOC1-208ENST00000592535 SUOXP51687 545 aa14□□□□□ -0.17
APOC1-208ENST00000592535 CDH6P55285 790 aa14□□□□□ -0.17
APOC1-208ENST00000592535 ELP6Q0PNE2 266 aa14□□□□□ -0.17
APOC1-208ENST00000592535 MMRN1Q13201 1228 aa14□□□□□ -0.17
APOC1-208ENST00000592535 KRT81Q14533 505 aa14□□□□□ -0.17
APOC1-208ENST00000592535 LBRQ14739 615 aaKnown RBP14□□□□□ -0.17
APOC1-208ENST00000592535 SMAD1Q15797 465 aaKnown RBP14□□□□□ -0.17
APOC1-208ENST00000592535 SLC18A3Q16572 532 aa14□□□□□ -0.17
APOC1-208ENST00000592535 ASTE1Q2TB18 679 aaPredicted RBP14□□□□□ -0.17
APOC1-208ENST00000592535 TMCO4Q5TGY1 634 aa14□□□□□ -0.17
APOC1-208ENST00000592535 BRAT1Q6PJG6 821 aa14□□□□□ -0.17
APOC1-208ENST00000592535 PARGQ86W56 976 aa14□□□□□ -0.17
APOC1-208ENST00000592535 GALNT15Q8N3T1 639 aa14□□□□□ -0.17
APOC1-208ENST00000592535 TP53I13Q8NBR0 393 aaPredicted RBP14□□□□□ -0.17
APOC1-208ENST00000592535 OR4C6Q8NH72 309 aa14□□□□□ -0.17
APOC1-208ENST00000592535 NSMCE3Q96MG7 304 aa14□□□□□ -0.17
APOC1-208ENST00000592535 PSKH2Q96QS6 385 aa14□□□□□ -0.17
APOC1-208ENST00000592535 ATP13A3Q9H7F0 1226 aa14□□□□□ -0.17
APOC1-208ENST00000592535 MBNL1Q9NR56 388 aaKnown RBP14□□□□□ -0.17
APOC1-208ENST00000592535 SEPT3Q9UH03 358 aa14□□□□□ -0.17
APOC1-208ENST00000592535 LRP4O75096 1905 aa14□□□□□ -0.17
APOC1-208ENST00000592535 SSU72P8A0A1W2PR75 194 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 TTC24A2A3L6 582 aaPredicted RBP13.99□□□□□ -0.17
APOC1-208ENST00000592535 RIOK3O14730 519 aaKnown RBP13.99□□□□□ -0.17
APOC1-208ENST00000592535 MAFKO60675 156 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 PROSCO94903 275 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 CSF2P04141 144 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 CAPNS1P04632 268 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 C1SP09871 688 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 H2AFZP0C0S5 128 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 C6P13671 934 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 NME1P15531 152 aaKnown RBP13.99□□□□□ -0.17
APOC1-208ENST00000592535 CKMT2P17540 419 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 IL4RP24394 825 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 SCNN1BP51168 640 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 ARSEP51690 589 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 HNRNPKP61978 463 aaKnown RBP eCLIP13.99□□□□□ -0.17
APOC1-208ENST00000592535 BCL2L1Q07817 233 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 NSUN2Q08J23 767 aaKnown RBP eCLIP13.99□□□□□ -0.17
APOC1-208ENST00000592535 EIF2B5Q13144 721 aaKnown RBP13.99□□□□□ -0.17
APOC1-208ENST00000592535 ZNF211Q13398 564 aaPredicted RBP13.99□□□□□ -0.17
APOC1-208ENST00000592535 IRF4Q15306 451 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 HADHQ16836 314 aaKnown RBP13.99□□□□□ -0.17
APOC1-208ENST00000592535 ATP13A4Q4VNC1 1196 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 ERAP2Q6P179 960 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 H2AFVQ71UI9 128 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 PGBD5Q8N414 524 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 FAM71BQ8TC56 605 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 CTNNBL1Q8WYA6 563 aaPredicted RBP13.99□□□□□ -0.17
APOC1-208ENST00000592535 ECHDC3Q96DC8 303 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 ZNF599Q96NL3 588 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 CHP1Q99653 195 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 C1QTNF7Q9BXJ2 289 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 DEF6Q9H4E7 631 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 ABHD10Q9NUJ1 306 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 RCOR3Q9P2K3 495 aaPredicted RBP13.99□□□□□ -0.17
APOC1-208ENST00000592535 UVRAGQ9P2Y5 699 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 KLF15Q9UIH9 416 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 ATP8A1Q9Y2Q0 1164 aa13.99□□□□□ -0.17
APOC1-208ENST00000592535 TRAFD1O14545 582 aaPredicted RBP13.98□□□□□ -0.17
APOC1-208ENST00000592535 AKR1B10O60218 316 aa13.98□□□□□ -0.17
APOC1-208ENST00000592535 MFAP3LO75121 409 aa13.98□□□□□ -0.17
APOC1-208ENST00000592535 NEBLO76041 1014 aa13.98□□□□□ -0.17
APOC1-208ENST00000592535 ACP1P24666 158 aa13.98□□□□□ -0.17
APOC1-208ENST00000592535 SERPINB6P35237 376 aa13.98□□□□□ -0.17
APOC1-208ENST00000592535 MMP12P39900 470 aa13.98□□□□□ -0.17
APOC1-208ENST00000592535 LIG3P49916 1009 aa13.98□□□□□ -0.17
APOC1-208ENST00000592535 RENBPP51606 427 aa13.98□□□□□ -0.17
APOC1-208ENST00000592535 THOP1P52888 689 aa13.98□□□□□ -0.17
APOC1-208ENST00000592535 ADKP55263 362 aaKnown RBP13.98□□□□□ -0.17
APOC1-208ENST00000592535 TAS2R40P59535 323 aa13.98□□□□□ -0.17
APOC1-208ENST00000592535 AP1S1P61966 158 aa13.98□□□□□ -0.17
APOC1-208ENST00000592535 RALGDSQ12967 914 aa13.98□□□□□ -0.17
APOC1-208ENST00000592535 DPYSL3Q14195 570 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms