RNA–Protein interactions for RNA: ENST00000592488.2

AP3D1-212, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-212ENST00000592488 H2AFZP0C0S5 128 aa17.02■□□□□ 0.32
AP3D1-212ENST00000592488 ITIH2P19823 946 aa17.02■□□□□ 0.32
AP3D1-212ENST00000592488 RENBPP51606 427 aa17.02■□□□□ 0.32
AP3D1-212ENST00000592488 CDH6P55285 790 aa17.02■□□□□ 0.32
AP3D1-212ENST00000592488 NSUN2Q08J23 767 aaKnown RBP eCLIP17.02■□□□□ 0.32
AP3D1-212ENST00000592488 LBRQ14739 615 aaKnown RBP17.02■□□□□ 0.32
AP3D1-212ENST00000592488 UGP2Q16851 508 aa17.02■□□□□ 0.32
AP3D1-212ENST00000592488 ASTE1Q2TB18 679 aaPredicted RBP17.02■□□□□ 0.32
AP3D1-212ENST00000592488 TMEM52BQ4KMG9 183 aa17.02■□□□□ 0.32
AP3D1-212ENST00000592488 ERAP2Q6P179 960 aa17.02■□□□□ 0.32
AP3D1-212ENST00000592488 H2AFVQ71UI9 128 aa17.02■□□□□ 0.32
AP3D1-212ENST00000592488 TMPRSS7Q7RTY8 843 aa17.02■□□□□ 0.32
AP3D1-212ENST00000592488 CAMK1DQ8IU85 385 aa17.02■□□□□ 0.32
AP3D1-212ENST00000592488 ATPAF2Q8N5M1 289 aa17.02■□□□□ 0.32
AP3D1-212ENST00000592488 KDF1Q8NAX2 398 aaPredicted RBP17.02■□□□□ 0.32
AP3D1-212ENST00000592488 PSKH2Q96QS6 385 aa17.02■□□□□ 0.32
AP3D1-212ENST00000592488 WRAP53Q9BUR4 548 aaKnown RBP17.02■□□□□ 0.32
AP3D1-212ENST00000592488 PACSIN1Q9BY11 444 aa17.02■□□□□ 0.32
AP3D1-212ENST00000592488 ABHD10Q9NUJ1 306 aa17.02■□□□□ 0.32
AP3D1-212ENST00000592488 LCMT1Q9UIC8 334 aa17.02■□□□□ 0.32
AP3D1-212ENST00000592488 PCDHGA1Q9Y5H4 931 aa17.02■□□□□ 0.32
AP3D1-212ENST00000592488 CFAP47Q6ZTR5 3102 aa17.01■□□□□ 0.31
AP3D1-212ENST00000592488 PTPRBP23467 1997 aa17.01■□□□□ 0.31
AP3D1-212ENST00000592488 AKR1B10O60218 316 aa17.01■□□□□ 0.31
AP3D1-212ENST00000592488 DGKAP23743 735 aa17.01■□□□□ 0.31
AP3D1-212ENST00000592488 AP1S1P61966 158 aa17.01■□□□□ 0.31
AP3D1-212ENST00000592488 BCL2L1Q07817 233 aa17.01■□□□□ 0.31
AP3D1-212ENST00000592488 SLC10A7Q0GE19 358 aa17.01■□□□□ 0.31
AP3D1-212ENST00000592488 DNAJC3Q13217 504 aa17.01■□□□□ 0.31
AP3D1-212ENST00000592488 PDE1CQ14123 709 aaPredicted RBP17.01■□□□□ 0.31
AP3D1-212ENST00000592488 FZD2Q14332 565 aa17.01■□□□□ 0.31
AP3D1-212ENST00000592488 ZNF235Q14590 738 aa17.01■□□□□ 0.31
AP3D1-212ENST00000592488 CCNI2Q6ZMN8 369 aaPredicted RBP17.01■□□□□ 0.31
AP3D1-212ENST00000592488 PARGQ86W56 976 aa17.01■□□□□ 0.31
AP3D1-212ENST00000592488 GALNT15Q8N3T1 639 aa17.01■□□□□ 0.31
AP3D1-212ENST00000592488 SLC25A45Q8N413 288 aa17.01■□□□□ 0.31
AP3D1-212ENST00000592488 FAM71BQ8TC56 605 aa17.01■□□□□ 0.31
AP3D1-212ENST00000592488 CENPTQ96BT3 561 aa17.01■□□□□ 0.31
AP3D1-212ENST00000592488 PCDH12Q9NPG4 1184 aa17.01■□□□□ 0.31
AP3D1-212ENST00000592488 DNAJC28Q9NX36 388 aa17.01■□□□□ 0.31
AP3D1-212ENST00000592488 MUSKO15146 869 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 RFPL3O75679 317 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 PIAS2O75928 621 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 C1SP09871 688 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 TMEM253P0C7T8 217 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 CDK4P11802 303 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 IGFALSP35858 605 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 GJC1P36383 396 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 HSPA9P38646 679 aaKnown RBP17■□□□□ 0.31
AP3D1-212ENST00000592488 MMP12P39900 470 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 ACADVLP49748 655 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 SCNN1BP51168 640 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 PFN3P60673 137 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 HNRNPKP61978 463 aaKnown RBP eCLIP17■□□□□ 0.312e-6■■■■□ 22.8
AP3D1-212ENST00000592488 ITPR1Q14643 2758 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 SMAD1Q15797 465 aaKnown RBP17■□□□□ 0.31
AP3D1-212ENST00000592488 HS1BP3Q53T59 392 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 DHRS13Q6UX07 377 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 ZSWIM9Q86XI8 627 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 PAF1Q8N7H5 531 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 OR4C6Q8NH72 309 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 ZCCHC14Q8WYQ9 949 aaKnown RBP17■□□□□ 0.31
AP3D1-212ENST00000592488 UCKL1Q9NWZ5 548 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 ATP8A1Q9Y2Q0 1164 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 ANKRD36A6QL64 1941 aa17■□□□□ 0.31
AP3D1-212ENST00000592488 KNTC1P50748 2209 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 H3BM21 787 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 TRIM38O00635 465 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 RIOK3O14730 519 aaKnown RBP16.99■□□□□ 0.31
AP3D1-212ENST00000592488 SIGLEC6O43699 453 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 MAFKO60675 156 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 PEX11BO96011 259 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 CD48P09326 243 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 NME1P15531 152 aaKnown RBP16.99■□□□□ 0.31
AP3D1-212ENST00000592488 CKMT2P17540 419 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 IL4RP24394 825 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 MAN1A1P33908 653 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 THOP1P52888 689 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 ADKP55263 362 aaKnown RBP16.99■□□□□ 0.31
AP3D1-212ENST00000592488 YPEL5P62699 121 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 ZNF211Q13398 564 aaPredicted RBP16.99■□□□□ 0.31
AP3D1-212ENST00000592488 PROX2Q3B8N5 592 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 ZNF542PQ5EBM4 170 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 TPRG1LQ5T0D9 272 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 KDM7AQ6ZMT4 941 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 CPNE8Q86YQ8 564 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 CNGA4Q8IV77 575 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 BBS5Q8N3I7 341 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 TP53I13Q8NBR0 393 aaPredicted RBP16.99■□□□□ 0.31
AP3D1-212ENST00000592488 NSMCE1Q8WV22 266 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 ECHDC3Q96DC8 303 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 CCDC42Q96M95 316 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 TDRD6O60522 2096 aaKnown RBP16.99■□□□□ 0.31
AP3D1-212ENST00000592488 APC2O95996 2303 aa16.99■□□□□ 0.31
AP3D1-212ENST00000592488 ACACAQ13085 2346 aa16.98■□□□□ 0.31
AP3D1-212ENST00000592488 PLXNB3Q9ULL4 1909 aa16.98■□□□□ 0.31
AP3D1-212ENST00000592488 ZFYVE26Q68DK2 2539 aa16.98■□□□□ 0.31
AP3D1-212ENST00000592488 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.98■□□□□ 0.31
AP3D1-212ENST00000592488 NEMP2A6NFY4 417 aa16.98■□□□□ 0.31
AP3D1-212ENST00000592488 TOR1BO14657 336 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms