RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 GOLGA8CPA6NN73 597 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 MUSKO15146 869 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 MAFKO60675 156 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 RXRGP48443 463 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 SCNN1BP51168 640 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 HADHBP55084 474 aaKnown RBP14.07□□□□□ -0.16
CLIP3-205ENST00000592017 GBE1Q04446 702 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 BNIP3Q12983 259 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 STAT4Q14765 748 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 PAFAH1B3Q15102 231 aaKnown RBP14.07□□□□□ -0.16
CLIP3-205ENST00000592017 TMEM259Q4ZIN3 620 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 SLC45A4Q5BKX6 768 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 SRLQ86TD4 932 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 TTC7BQ86TV6 843 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 IQCHQ86VS3 1027 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 RFX6Q8HWS3 928 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 BBS5Q8N3I7 341 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 PQLC3Q8N755 202 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 LRRN4Q8WUT4 740 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 RAB7BQ96AH8 199 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 FAF2Q96CS3 445 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 ATP13A3Q9H7F0 1226 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 REXO2Q9Y3B8 237 aaKnown RBP14.07□□□□□ -0.16
CLIP3-205ENST00000592017 CHD5Q8TDI0 1954 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 ZFHX4Q86UP3 3567 aa14.07□□□□□ -0.16
CLIP3-205ENST00000592017 CHD6Q8TD26 2715 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 TTC24A2A3L6 582 aaPredicted RBP14.06□□□□□ -0.16
CLIP3-205ENST00000592017 TNFSF14O43557 240 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 AP1G1O43747 822 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 NEBLO76041 1014 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 ITGAVP06756 1048 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 EPHA8P29322 1005 aaPredicted RBP14.06□□□□□ -0.16
CLIP3-205ENST00000592017 SERPINA4P29622 427 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 AKT2P31751 481 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 GARSP41250 739 aaKnown RBP14.06□□□□□ -0.16
CLIP3-205ENST00000592017 MMP13P45452 471 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 RENBPP51606 427 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 MAXP61244 160 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 DYNLT1P63172 113 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 RPS21P63220 83 aaKnown RBP14.06□□□□□ -0.16
CLIP3-205ENST00000592017 BCL2L1Q07817 233 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 GALNT2Q10471 571 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 OVGP1Q12889 678 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 FGL2Q14314 439 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 GRM3Q14832 879 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 LRRC38Q5VT99 294 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 KIAA1161Q6NSJ0 714 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 CCNI2Q6ZMN8 369 aaPredicted RBP14.06□□□□□ -0.16
CLIP3-205ENST00000592017 KANSL1Q7Z3B3 1105 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 DAAM2Q86T65 1068 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 MARCH9Q86YJ5 346 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 CAMK1DQ8IU85 385 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 TMEM139Q8IV31 216 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 KLHDC7BQ96G42 594 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 FEM1CQ96JP0 617 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 ZNF830Q96NB3 372 aaPredicted RBP14.06□□□□□ -0.16
CLIP3-205ENST00000592017 RNF157Q96PX1 679 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 PSKH2Q96QS6 385 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 TUBGCP5Q96RT8 1024 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 DESI2Q9BSY9 194 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 MAK16Q9BXY0 300 aaKnown RBP14.06□□□□□ -0.16
CLIP3-205ENST00000592017 CPEB1Q9BZB8 566 aaKnown RBP14.06□□□□□ -0.16
CLIP3-205ENST00000592017 SUV39H2Q9H5I1 410 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 CAAP1Q9H8G2 361 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 DDX56Q9NY93 547 aaKnown RBP14.06□□□□□ -0.16
CLIP3-205ENST00000592017 SALL4Q9UJQ4 1053 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 TTLL3Q9Y4R7 772 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 HEY1Q9Y5J3 304 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 ALG6Q9Y672 507 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 CFAP47Q6ZTR5 3102 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 FREM2Q5SZK8 3169 aa14.06□□□□□ -0.16
CLIP3-205ENST00000592017 C3orf70A6NLC5 250 aaPredicted RBP14.05□□□□□ -0.16
CLIP3-205ENST00000592017 APOL1O14791 398 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 RAD51BO15315 384 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 SPINT1O43278 529 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 PSTPIP1O43586 416 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 PEX11BO96011 259 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 CAPNS1P04632 268 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 PRKCGP05129 697 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 ITIH2P19823 946 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 HNRNPA2B1P22626 353 aaKnown RBP14.05□□□□□ -0.16
CLIP3-205ENST00000592017 CSNK1DP48730 415 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 ARRB1P49407 418 aaPredicted RBP14.05□□□□□ -0.16
CLIP3-205ENST00000592017 VAV2P52735 878 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 CLDN2P57739 230 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 AP1S1P61966 158 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 LLGL1Q15334 1064 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 IFI16Q16666 785 aaKnown RBP14.05□□□□□ -0.16
CLIP3-205ENST00000592017 MARC1Q5VT66 337 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 TIGD7Q6NT04 549 aaPredicted RBP14.05□□□□□ -0.16
CLIP3-205ENST00000592017 C11orf63Q6NUN7 778 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 PGBD5Q8N414 524 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.05□□□□□ -0.16
CLIP3-205ENST00000592017 EID2Q8N6I1 236 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 CCNYQ8ND76 341 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 TPCN2Q8NHX9 752 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 CXorf40AQ8TE69 158 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 WRAP53Q9BUR4 548 aaKnown RBP14.05□□□□□ -0.16
CLIP3-205ENST00000592017 NT5MQ9NPB1 228 aa14.05□□□□□ -0.16
CLIP3-205ENST00000592017 SCUBE2Q9NQ36 999 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms