RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 GBE1Q04446 702 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 ELP6Q0PNE2 266 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 SHBQ15464 509 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 TRIP6Q15654 476 aaKnown RBP16.55■□□□□ 0.24
CIRBP-233ENST00000591622 IFI16Q16666 785 aaKnown RBP16.55■□□□□ 0.24
CIRBP-233ENST00000591622 TMEM52BQ4KMG9 183 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 ZSWIM9Q86XI8 627 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 OXR1Q8N573 874 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 OR13H1Q8NG92 308 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 CXorf40AQ8TE69 158 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 RHBDD1Q8TEB9 315 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 ECHDC3Q96DC8 303 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 BMFQ96LC9 184 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 NSMCE3Q96MG7 304 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 TSGA13Q96PP4 275 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 NUDCD1Q96RS6 583 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 MGME1Q9BQP7 344 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 PCDH12Q9NPG4 1184 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 ALG6Q9Y672 507 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 TTC24A2A3L6 582 aaPredicted RBP16.54■□□□□ 0.24
CIRBP-233ENST00000591622 POM121BA6NF01 834 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 A6NNZ2 444 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 TRAFD1O14545 582 aaPredicted RBP16.54■□□□□ 0.24
CIRBP-233ENST00000591622 RIOK3O14730 519 aaKnown RBP16.54■□□□□ 0.24
CIRBP-233ENST00000591622 FPGTO14772 594 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 MATN3O15232 486 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 MMP20O60882 483 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 TM7SF2O76062 418 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 IPO7O95373 1038 aaKnown RBP16.54■□□□□ 0.24
CIRBP-233ENST00000591622 MAP3K6O95382 1288 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 KRT1P04264 644 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 MX2P20592 715 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 CCNCP24863 283 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 GRK6P43250 576 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 RXRGP48443 463 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 POLR2LP62875 67 aaKnown RBP16.54■□□□□ 0.24
CIRBP-233ENST00000591622 SLC10A2Q12908 348 aaPredicted RBP16.54■□□□□ 0.24
CIRBP-233ENST00000591622 RALGPS1Q5JS13 557 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 TIGD7Q6NT04 549 aaPredicted RBP16.54■□□□□ 0.24
CIRBP-233ENST00000591622 ERAP2Q6P179 960 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 TEX26Q8N6G2 289 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 DENND6BQ8NEG7 585 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 BAHD1Q8TBE0 780 aaPredicted RBP16.54■□□□□ 0.24
CIRBP-233ENST00000591622 SAP25Q8TEE9 199 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 MAML1Q92585 1016 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 FATE1Q969F0 183 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 WRAP53Q9BUR4 548 aaKnown RBP16.54■□□□□ 0.24
CIRBP-233ENST00000591622 DDX56Q9NY93 547 aaKnown RBP16.54■□□□□ 0.24
CIRBP-233ENST00000591622 DTLQ9NZJ0 730 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 IMPACTQ9P2X3 320 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 BTBD3Q9Y2F9 522 aa16.54■□□□□ 0.24
CIRBP-233ENST00000591622 TNNT1P13805 278 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 EPHA8P29322 1005 aaPredicted RBP16.53■□□□□ 0.24
CIRBP-233ENST00000591622 PMLP29590 882 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 MAXP61244 160 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 ODF2Q5BJF6 829 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 SLC9A4Q6AI14 798 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 RAD9BQ6WBX8 426 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 KYAT3Q6YP21 454 aaKnown RBP16.53■□□□□ 0.24
CIRBP-233ENST00000591622 Q6ZSR6 202 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 GLRX5Q86SX6 157 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 GATAD2AQ86YP4 633 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 DCP2Q8IU60 420 aaKnown RBP16.53■□□□□ 0.24
CIRBP-233ENST00000591622 SLC22A18ASQ8N1D0 253 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 PAF1Q8N7H5 531 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 PLD5Q8N7P1 536 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.53■□□□□ 0.24
CIRBP-233ENST00000591622 SPOCK2Q92563 424 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 RNF25Q96BH1 459 aaPredicted RBP16.53■□□□□ 0.24
CIRBP-233ENST00000591622 CENPTQ96BT3 561 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 CDC6Q99741 560 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 BAG1Q99933 345 aaPredicted RBP16.53■□□□□ 0.24
CIRBP-233ENST00000591622 C1QTNF7Q9BXJ2 289 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 MAK16Q9BXY0 300 aaKnown RBP16.53■□□□□ 0.24
CIRBP-233ENST00000591622 NOD2Q9HC29 1040 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 SCUBE2Q9NQ36 999 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 ATP8A1Q9Y2Q0 1164 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 PCDHGC4Q9Y5F7 938 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 NCOR2Q9Y618 2525 aa16.53■□□□□ 0.24
CIRBP-233ENST00000591622 A0A1W2PQ67 120 aa16.52■□□□□ 0.24
CIRBP-233ENST00000591622 RCCD1A6NED2 376 aa16.52■□□□□ 0.24
CIRBP-233ENST00000591622 HTRA2O43464 458 aaPredicted RBP16.52■□□□□ 0.24
CIRBP-233ENST00000591622 PSTPIP1O43586 416 aa16.52■□□□□ 0.24
CIRBP-233ENST00000591622 SOCS5O75159 536 aa16.52■□□□□ 0.24
CIRBP-233ENST00000591622 ITGAVP06756 1048 aa16.52■□□□□ 0.24
CIRBP-233ENST00000591622 MMP12P39900 470 aa16.52■□□□□ 0.24
CIRBP-233ENST00000591622 BNIP3Q12983 259 aa16.52■□□□□ 0.24
CIRBP-233ENST00000591622 INAVAQ3KP66 663 aa16.52■□□□□ 0.24
CIRBP-233ENST00000591622 C11orf63Q6NUN7 778 aa16.52■□□□□ 0.24
CIRBP-233ENST00000591622 PTAR1Q7Z6K3 402 aaPredicted RBP16.52■□□□□ 0.24
CIRBP-233ENST00000591622 SPC24Q8NBT2 197 aa16.52■□□□□ 0.24
CIRBP-233ENST00000591622 CCNYQ8ND76 341 aa16.52■□□□□ 0.24
CIRBP-233ENST00000591622 HDAC11Q96DB2 347 aa16.52■□□□□ 0.24
CIRBP-233ENST00000591622 CALR3Q96L12 384 aaKnown RBP16.52■□□□□ 0.24
CIRBP-233ENST00000591622 ZNF830Q96NB3 372 aaPredicted RBP16.52■□□□□ 0.24
CIRBP-233ENST00000591622 GOLPH3Q9H4A6 298 aa16.52■□□□□ 0.24
CIRBP-233ENST00000591622 NT5MQ9NPB1 228 aa16.52■□□□□ 0.24
CIRBP-233ENST00000591622 GPR27Q9NS67 375 aa16.52■□□□□ 0.24
CIRBP-233ENST00000591622 AMACRQ9UHK6 382 aa16.52■□□□□ 0.24
CIRBP-233ENST00000591622 SALL4Q9UJQ4 1053 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms