RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 TBC1D3FA6NER0 549 aaPredicted RBP19.3■□□□□ 0.68
DDX39A-214ENST00000590556 UPK3BL1B0FP48 263 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 TBC1D3LB9A6J9 549 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 UPK3BL2E5RIL1 263 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 F5H423 210 aaPredicted RBP19.3■□□□□ 0.68
DDX39A-214ENST00000590556 PLRG1O43660 514 aaKnown RBP19.3■□□□□ 0.68
DDX39A-214ENST00000590556 OPHN1O60890 802 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 GCATO75600 419 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 RHOBTB1O94844 696 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 PGLSO95336 258 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 TUBB4AP04350 444 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 TBC1D3HP0C7X1 549 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 SUOXP51687 545 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 GDF10P55107 478 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 TAS2R38P59533 333 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 ELF2Q15723 593 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 PLK5Q496M5 336 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 TBC1D3GQ6DHY5 549 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 TBC1D3CQ6IPX1 549 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 ARHGEF18Q6ZSZ5 1173 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 ZSWIM9Q86XI8 627 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 TMEFF1Q8IYR6 380 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 TBC1D3Q8IZP1 549 aaPredicted RBP19.3■□□□□ 0.68
DDX39A-214ENST00000590556 DEFB119Q8N690 84 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 OR2T34Q8NGX1 318 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 SPATA22Q8NHS9 363 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 MAGOHBQ96A72 148 aaKnown RBP19.3■□□□□ 0.68
DDX39A-214ENST00000590556 RTP4Q96DX8 246 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 ZC3H10Q96K80 434 aaKnown RBP19.3■□□□□ 0.68
DDX39A-214ENST00000590556 DUSP15Q9H1R2 295 aaPredicted RBP19.3■□□□□ 0.68
DDX39A-214ENST00000590556 GBA3Q9H227 469 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 KDM4CQ9H3R0 1056 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 RNF14Q9UBS8 474 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 PRR23AA6NEV1 266 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 KIF2AO00139 706 aaPredicted RBP19.29■□□□□ 0.68
DDX39A-214ENST00000590556 CPP00450 1065 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 IFNB1P01574 187 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 ABL2P42684 1182 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 PAFAH1B1P43034 410 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 KCNJ1P48048 391 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 SLC14A2Q15849 920 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 UGP2Q16851 508 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 LRRC73Q5JTD7 316 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 GSTA5Q7RTV2 222 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 CCDC89Q8N998 374 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 CADM4Q8NFZ8 388 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 TDRD1Q9BXT4 1180 aaKnown RBP19.29■□□□□ 0.68
DDX39A-214ENST00000590556 PCED1AQ9H1Q7 454 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 EPC1Q9H2F5 836 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 C6orf106Q9H6K1 298 aaPredicted RBP19.29■□□□□ 0.68
DDX39A-214ENST00000590556 PREBQ9HCU5 417 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 UBP1Q9NZI7 540 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 FAM153AQ9UHL3 310 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 RAPGEFL1Q9UHV5 662 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 RAB23Q9ULC3 237 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 CHKBQ9Y259 395 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 FADS3Q9Y5Q0 445 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 SDK1Q7Z5N4 2213 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 CEP192Q8TEP8 1941 aa19.29■□□□□ 0.68
DDX39A-214ENST00000590556 NEMP1O14524 444 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 AP1G1O43747 822 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 PMPCBO75439 489 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 PCDH8O95206 1070 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 MT-CYBP00156 380 aaPredicted RBP19.28■□□□□ 0.68
DDX39A-214ENST00000590556 PSMB4P28070 264 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 NBL1P41271 181 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 PRPSAP1Q14558 356 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 CYP1B1Q16678 543 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 P3H1Q32P28 736 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 SPDYCQ5MJ68 293 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 PMS2CLQ68D20 193 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 ERAP2Q6P179 960 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 C12orf50Q8NA57 414 aaPredicted RBP19.28■□□□□ 0.68
DDX39A-214ENST00000590556 ATL2Q8NHH9 583 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 SPOCK2Q92563 424 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 ZNF592Q92610 1267 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 FOXJ1Q92949 421 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 TADA1Q96BN2 335 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 OXNAD1Q96HP4 312 aaPredicted RBP19.28■□□□□ 0.68
DDX39A-214ENST00000590556 PCDH9Q9HC56 1237 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 PCDH12Q9NPG4 1184 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 VPS45Q9NRW7 570 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 PHTF1Q9UMS5 762 aa19.28■□□□□ 0.68
DDX39A-214ENST00000590556 METTL12A8MUP2 240 aa19.27■□□□□ 0.68
DDX39A-214ENST00000590556 AREL1O15033 823 aa19.27■□□□□ 0.68
DDX39A-214ENST00000590556 TSPAN6O43657 245 aa19.27■□□□□ 0.68
DDX39A-214ENST00000590556 FZD6O60353 706 aa19.27■□□□□ 0.68
DDX39A-214ENST00000590556 PHF2O75151 1096 aa19.27■□□□□ 0.68
DDX39A-214ENST00000590556 ANXA9O76027 345 aa19.27■□□□□ 0.68
DDX39A-214ENST00000590556 PRKCGP05129 697 aa19.27■□□□□ 0.68
DDX39A-214ENST00000590556 PDHA1P08559 390 aa19.27■□□□□ 0.68
DDX39A-214ENST00000590556 ITIH2P19823 946 aa19.27■□□□□ 0.68
DDX39A-214ENST00000590556 ACTN2P35609 894 aa19.27■□□□□ 0.68
DDX39A-214ENST00000590556 COILP38432 576 aaPredicted RBP19.27■□□□□ 0.68
DDX39A-214ENST00000590556 DHPSP49366 369 aaPredicted RBP19.27■□□□□ 0.68
DDX39A-214ENST00000590556 EPHB1P54762 984 aa19.27■□□□□ 0.68
DDX39A-214ENST00000590556 LMNB2Q03252 620 aa19.27■□□□□ 0.68
DDX39A-214ENST00000590556 ELP6Q0PNE2 266 aa19.27■□□□□ 0.68
DDX39A-214ENST00000590556 PCSK7Q16549 785 aa19.27■□□□□ 0.68
DDX39A-214ENST00000590556 LPAL2Q16609 132 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms