RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 MIA3Q5JRA6 1907 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 CXorf49A8MYA2 514 aaPredicted RBP17.13■□□□□ 0.33
GCDH-212ENST00000590530 FOXO6A8MYZ6 492 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 PRRT4C9JH25 899 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 PRPF4O43172 522 aaKnown RBP eCLIP17.13■□□□□ 0.331e-7■■□□□ 11.4
GCDH-212ENST00000590530 ECI2O75521 394 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 FAM155BO75949 473 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 KDSRQ06136 332 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 PDGFRLQ15198 375 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 SLC14A2Q15849 920 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 INO80DQ53TQ3 878 aaPredicted RBP17.13■□□□□ 0.33
GCDH-212ENST00000590530 RETSATQ6NUM9 610 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 CES3Q6UWW8 571 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 RANBP10Q6VN20 620 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 YAF2Q8IY57 180 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 BBS5Q8N3I7 341 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 DEFB123Q8N688 67 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.13■□□□□ 0.33
GCDH-212ENST00000590530 PTCD2Q8WV60 388 aaKnown RBP17.13■□□□□ 0.33
GCDH-212ENST00000590530 CDKL2Q92772 493 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 NECTIN4Q96NY8 510 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 SMC6Q96SB8 1091 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 FSD1LQ9BXM9 530 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 MTG2Q9H4K7 406 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 ARNT2Q9HBZ2 717 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 INTS9Q9NV88 658 aaKnown RBP17.13■□□□□ 0.33
GCDH-212ENST00000590530 PCDHGC4Q9Y5F7 938 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 RPS6KL1Q9Y6S9 549 aa17.13■□□□□ 0.33
GCDH-212ENST00000590530 ANHXE9PGG2 379 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 FOSL2P15408 326 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 GJA4P35212 333 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 OPRD1P41143 372 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 SERPINB9P50453 376 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 RHOAP61586 193 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 SLC12A1Q13621 1099 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 PTPRRQ15256 657 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 SMAD1Q15797 465 aaKnown RBP17.12■□□□□ 0.33
GCDH-212ENST00000590530 AAK1Q2M2I8 961 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.12■□□□□ 0.33
GCDH-212ENST00000590530 MRGPRX3Q96LB0 322 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 TRMT61BQ9BVS5 477 aaKnown RBP17.12■□□□□ 0.33
GCDH-212ENST00000590530 KIFC1Q9BW19 673 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 CCDC134Q9H6E4 229 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 MRM3Q9HC36 420 aaKnown RBP17.12■□□□□ 0.33
GCDH-212ENST00000590530 FBRSL1Q9HCM7 1045 aaKnown RBP17.12■□□□□ 0.33
GCDH-212ENST00000590530 FAM169AQ9Y6X4 670 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 CCDC78A2IDD5 438 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 FAM47DPA6NHR8 397 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 KRT37O76014 449 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 ECT2LQ008S8 904 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 MGAT5Q09328 741 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 LGSNQ5TDP6 509 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 UNC5BQ8IZJ1 945 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 E2F7Q96AV8 911 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 ZNF669Q96BR6 464 aaPredicted RBP17.12■□□□□ 0.33
GCDH-212ENST00000590530 ALKBH8Q96BT7 664 aaKnown RBP17.12■□□□□ 0.33
GCDH-212ENST00000590530 MTBPQ96DY7 904 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 CERS2Q96G23 380 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 SLC2A11Q9BYW1 496 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 CIPCQ9C0C6 399 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 EPN3Q9H201 632 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 ZDHHC4Q9NPG8 344 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 SCUBE2Q9NQ36 999 aa17.12■□□□□ 0.33
GCDH-212ENST00000590530 MYLKQ15746 1914 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 ZCWPW2A0A1B0GU75 182 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 ATP9BO43861 1147 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 BNIP3LO60238 219 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 PRKCGP05129 697 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 PDHA1P08559 390 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 ATXN1LP0C7T5 689 aaKnown RBP17.11■□□□□ 0.33
GCDH-212ENST00000590530 CNTFP26441 200 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 GALNT3Q14435 633 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 PTPRNQ16849 979 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 ANKRD20A4Q4UJ75 823 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 PCID2Q5JVF3 399 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 AHI1Q8N157 1196 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 PHTF2Q8N3S3 785 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 ZNF366Q8N895 744 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 MYO19Q96H55 970 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 ZNF778Q96MU6 729 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 FCRL3Q96P31 734 aaPredicted RBP17.11■□□□□ 0.33
GCDH-212ENST00000590530 NUDCD1Q96RS6 583 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 KCNK9Q9NPC2 374 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 NKIRAS1Q9NYS0 192 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 LIMD1Q9UGP4 676 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 EVLQ9UI08 416 aaPredicted RBP17.11■□□□□ 0.33
GCDH-212ENST00000590530 KIF26AQ9ULI4 1882 aaPredicted RBP17.11■□□□□ 0.33
GCDH-212ENST00000590530 CHKBQ9Y259 395 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 HS3ST2Q9Y278 367 aa17.11■□□□□ 0.33
GCDH-212ENST00000590530 A0A1W2PPM1 405 aa17.1■□□□□ 0.33
GCDH-212ENST00000590530 KRT38O76015 456 aa17.1■□□□□ 0.33
GCDH-212ENST00000590530 SNRPAP09012 282 aaKnown RBP17.1■□□□□ 0.33
GCDH-212ENST00000590530 TRAF2Q12933 501 aa17.1■□□□□ 0.33
GCDH-212ENST00000590530 SMAD4Q13485 552 aaKnown RBP17.1■□□□□ 0.33
GCDH-212ENST00000590530 MPP2Q14168 576 aa17.1■□□□□ 0.33
GCDH-212ENST00000590530 IER5LQ5T953 404 aa17.1■□□□□ 0.33
GCDH-212ENST00000590530 NCEH1Q6PIU2 408 aa17.1■□□□□ 0.33
GCDH-212ENST00000590530 SGSM3Q96HU1 749 aa17.1■□□□□ 0.33
GCDH-212ENST00000590530 IL1RAPL1Q9NZN1 696 aa17.1■□□□□ 0.33
GCDH-212ENST00000590530 ERVW-1Q9UQF0 538 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms