RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 FYB2Q5VWT5 728 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 C16orf46Q6P387 395 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 LINGO4Q6UY18 593 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 CMC1Q7Z7K0 106 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 RNF135Q8IUD6 432 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 CNTN4Q8IWV2 1026 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 FAM217AQ8IXS0 508 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 MRPL43Q8N983 215 aaKnown RBP8.84□□□□□ -0.99
SMAD4-206ENST00000588860 CCDC63Q8NA47 563 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 PHOSPHO2Q8TCD6 241 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 SPPL3Q8TCT6 385 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 POF1BQ8WVV4 589 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 ATP2A3Q93084 1043 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 TMA16Q96EY4 203 aaKnown RBP8.84□□□□□ -0.99
SMAD4-206ENST00000588860 THOC1Q96FV9 657 aaKnown RBP8.84□□□□□ -0.99
SMAD4-206ENST00000588860 VPS39Q96JC1 886 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 EXOC2Q96KP1 924 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 C17orf80Q9BSJ5 609 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 MECRQ9BV79 373 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 MTIF3Q9H2K0 278 aaKnown RBP8.84□□□□□ -0.99
SMAD4-206ENST00000588860 TTYH1Q9H313 450 aaPredicted RBP8.84□□□□□ -0.99
SMAD4-206ENST00000588860 NOD2Q9HC29 1040 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 TLR9Q9NR96 1032 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 SNX15Q9NRS6 342 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 TREX1Q9NSU2 369 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 HCFC1R1Q9NWW0 138 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 GGT7Q9UJ14 662 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 ZNF510Q9Y2H8 683 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 ARL2BPQ9Y2Y0 163 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 STARD13Q9Y3M8 1113 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 RWDD3Q9Y3V2 267 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 LINC01553A4QN01 128 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 CCT8L1PA6NM43 557 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 LEFTY2O00292 366 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 NRG2O14511 850 aaPredicted RBP8.83□□□□□ -1
SMAD4-206ENST00000588860 INSIG1O15503 277 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 SNAP91O60641 907 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 SIN3BO75182 1162 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 TMCC1O94876 653 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 FGF19O95750 216 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 NDST3O95803 873 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 PFKLP17858 780 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 ARNTP27540 789 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 MZF1P28698 734 aaPredicted RBP8.83□□□□□ -1
SMAD4-206ENST00000588860 GMPRP36959 345 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 HADHAP40939 763 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 CSKP41240 450 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 SLC1A2P43004 574 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 MAGEA12P43365 314 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 CLCN4P51793 760 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 IRX4P78413 519 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 ARF5P84085 180 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 ZXDBP98169 803 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 CDK18Q07002 472 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 CTBP1Q13363 440 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 LAMB3Q13751 1172 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 GRM3Q14832 879 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 SLC14A2Q15849 920 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 CNGA3Q16281 694 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 ARHGAP15Q53QZ3 475 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 FSCBQ5H9T9 825 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 PPM1JQ5JR12 505 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 GPR158Q5T848 1215 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 ZNF470Q6ECI4 717 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 ALG1LQ6GMV1 187 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 FSTL4Q6MZW2 842 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 KYAT3Q6YP21 454 aaKnown RBP8.83□□□□□ -1
SMAD4-206ENST00000588860 NLRP9Q7RTR0 991 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 OTOAQ7RTW8 1153 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 YTHDF3Q7Z739 585 aaKnown RBP8.83□□□□□ -1
SMAD4-206ENST00000588860 ZC3HC1Q86WB0 502 aaKnown RBP8.83□□□□□ -1
SMAD4-206ENST00000588860 NUDCD3Q8IVD9 361 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 SLC41A1Q8IVJ1 513 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 MFN1Q8IWA4 741 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 DENND6AQ8IWF6 608 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 BBS7Q8IWZ6 715 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 TDRD5Q8NAT2 981 aaKnown RBP8.83□□□□□ -1
SMAD4-206ENST00000588860 GABPB2Q8TAK5 448 aaPredicted RBP8.83□□□□□ -1
SMAD4-206ENST00000588860 SHKBP1Q8TBC3 707 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 BLOC1S5Q8TDH9 187 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 KCNV2Q8TDN2 545 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 MICAL1Q8TDZ2 1067 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 DDI1Q8WTU0 396 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 PTPRN2Q92932 1015 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 BHMTQ93088 406 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 ISL2Q96A47 359 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 PSKH2Q96QS6 385 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 UHRF1Q96T88 793 aaPredicted RBP8.83□□□□□ -1
SMAD4-206ENST00000588860 GPR22Q99680 433 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 LBHD1Q9BQE6 289 aaPredicted RBP8.83□□□□□ -1
SMAD4-206ENST00000588860 PLCD4Q9BRC7 762 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 LRFN3Q9BTN0 628 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 TSSK1BQ9BXA7 367 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 SMG9Q9H0W8 520 aaKnown RBP8.83□□□□□ -1
SMAD4-206ENST00000588860 RHOJQ9H4E5 214 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 CAB39LQ9H9S4 337 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 MAN1C1Q9NR34 630 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 DCDC2Q9UHG0 476 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 VPS28Q9UK41 221 aa8.83□□□□□ -1
SMAD4-206ENST00000588860 PRDM4Q9UKN5 801 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms