RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 TSPYL1Q9H0U9 437 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 CHKBQ9Y259 395 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 FAM170BA6NMN3 283 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 ALOX15BO15296 676 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 LEFTY1O75610 366 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 EPOP01588 193 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 UGT2B4P06133 528 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 TARSP26639 723 aaKnown RBP22.82■■□□□ 1.24
ACTN4-210ENST00000588618 MAGEA3P43357 314 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 CDH17Q12864 832 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 HIF1AQ16665 826 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 DENND5AQ6IQ26 1287 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 GDPD4Q6W3E5 623 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 CEP128Q6ZU80 1094 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 OR52K1Q8NGK4 314 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.82■■□□□ 1.245e-16■■■■■ 130.7
ACTN4-210ENST00000588618 RMDN1Q96DB5 314 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 TRIB3Q96RU7 358 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 GABRG3Q99928 467 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 FOXP3Q9BZS1 431 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 SUV39H2Q9H5I1 410 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 TBC1D17Q9HA65 648 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 LMAN1LQ9HAT1 526 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 PRSS16Q9NQE7 514 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 PCDHB9Q9Y5E1 797 aa22.82■■□□□ 1.24
ACTN4-210ENST00000588618 CHRNB1P11230 501 aa22.81■■□□□ 1.24
ACTN4-210ENST00000588618 HLA-DPA1P20036 260 aa22.81■■□□□ 1.24
ACTN4-210ENST00000588618 ZXDAP98168 799 aa22.81■■□□□ 1.24
ACTN4-210ENST00000588618 ARSIQ5FYB1 569 aa22.81■■□□□ 1.24
ACTN4-210ENST00000588618 LRRC8BQ6P9F7 803 aa22.81■■□□□ 1.24
ACTN4-210ENST00000588618 RANBP10Q6VN20 620 aa22.81■■□□□ 1.24
ACTN4-210ENST00000588618 CCDC25Q86WR0 208 aa22.81■■□□□ 1.24
ACTN4-210ENST00000588618 SLC25A41Q8N5S1 370 aa22.81■■□□□ 1.24
ACTN4-210ENST00000588618 ERLEC1Q96DZ1 483 aa22.81■■□□□ 1.24
ACTN4-210ENST00000588618 UHRF1Q96T88 793 aaPredicted RBP22.81■■□□□ 1.24
ACTN4-210ENST00000588618 WDR83Q9BRX9 315 aaKnown RBP22.81■■□□□ 1.24
ACTN4-210ENST00000588618 MFSD1Q9H3U5 465 aa22.81■■□□□ 1.24
ACTN4-210ENST00000588618 A0A1W2PQ67 120 aa22.8■■□□□ 1.24
ACTN4-210ENST00000588618 C1QTNF3-AMACRE9PGA6 284 aa22.8■■□□□ 1.24
ACTN4-210ENST00000588618 NDST3O95803 873 aa22.8■■□□□ 1.24
ACTN4-210ENST00000588618 PRLP01236 227 aa22.8■■□□□ 1.24
ACTN4-210ENST00000588618 IL1BP01584 269 aa22.8■■□□□ 1.24
ACTN4-210ENST00000588618 PDHA1P08559 390 aa22.8■■□□□ 1.24
ACTN4-210ENST00000588618 ATXN1LP0C7T5 689 aaKnown RBP22.8■■□□□ 1.24
ACTN4-210ENST00000588618 MLNP12872 115 aa22.8■■□□□ 1.24
ACTN4-210ENST00000588618 SLC1A5Q15758 541 aa22.8■■□□□ 1.24
ACTN4-210ENST00000588618 CENPUQ71F23 418 aa22.8■■□□□ 1.24
ACTN4-210ENST00000588618 LPCAT1Q8NF37 534 aa22.8■■□□□ 1.24
ACTN4-210ENST00000588618 PPP1R16AQ96I34 528 aa22.8■■□□□ 1.24
ACTN4-210ENST00000588618 FOXQ1Q9C009 403 aa22.8■■□□□ 1.24
ACTN4-210ENST00000588618 CASS4Q9NQ75 786 aa22.8■■□□□ 1.24
ACTN4-210ENST00000588618 WASF2Q9Y6W5 498 aa22.8■■□□□ 1.24
ACTN4-210ENST00000588618 NCOR1O75376 2440 aa22.8■■□□□ 1.24
ACTN4-210ENST00000588618 LOC285095A0A1B0GVY8 99 aa22.79■■□□□ 1.24
ACTN4-210ENST00000588618 KPNA3O00505 521 aaPredicted RBP22.79■■□□□ 1.24
ACTN4-210ENST00000588618 FGF1P05230 155 aa22.79■■□□□ 1.24
ACTN4-210ENST00000588618 CTSLP07711 333 aa22.79■■□□□ 1.24
ACTN4-210ENST00000588618 H2AFXP16104 143 aaPredicted RBP22.79■■□□□ 1.24
ACTN4-210ENST00000588618 CAMK2GQ13555 558 aaPredicted RBP22.79■■□□□ 1.24
ACTN4-210ENST00000588618 GALNT3Q14435 633 aa22.79■■□□□ 1.24
ACTN4-210ENST00000588618 FASTKD3Q14CZ7 662 aaKnown RBP22.79■■□□□ 1.24
ACTN4-210ENST00000588618 MAP9Q49MG5 647 aa22.79■■□□□ 1.24
ACTN4-210ENST00000588618 DNAJC21Q5F1R6 531 aaKnown RBP22.79■■□□□ 1.24
ACTN4-210ENST00000588618 NDUFAF2Q8N183 169 aa22.79■■□□□ 1.24
ACTN4-210ENST00000588618 KLHL32Q96NJ5 620 aa22.79■■□□□ 1.24
ACTN4-210ENST00000588618 FBRSQ9HAH7 460 aa22.79■■□□□ 1.24
ACTN4-210ENST00000588618 DYRK4Q9NR20 520 aa22.79■■□□□ 1.24
ACTN4-210ENST00000588618 BFARQ9NZS9 450 aa22.79■■□□□ 1.24
ACTN4-210ENST00000588618 TRAFD1O14545 582 aaPredicted RBP22.79■■□□□ 1.24
ACTN4-210ENST00000588618 HTRA2O43464 458 aaPredicted RBP22.79■■□□□ 1.24
ACTN4-210ENST00000588618 PPFIA2O75334 1257 aa22.79■■□□□ 1.24
ACTN4-210ENST00000588618 PGLSO95336 258 aa22.79■■□□□ 1.24
ACTN4-210ENST00000588618 SESN2P58004 480 aaPredicted RBP22.79■■□□□ 1.24
ACTN4-210ENST00000588618 POLR2LP62875 67 aaKnown RBP22.79■■□□□ 1.24
ACTN4-210ENST00000588618 UBAP2Q5T6F2 1119 aaKnown RBP22.79■■□□□ 1.24
ACTN4-210ENST00000588618 FAM46CQ5VWP2 391 aa22.79■■□□□ 1.24
ACTN4-210ENST00000588618 MMAAQ8IVH4 418 aaKnown RBP22.79■■□□□ 1.24
ACTN4-210ENST00000588618 ZNF687Q8N1G0 1237 aa22.79■■□□□ 1.24
ACTN4-210ENST00000588618 TMIEQ8NEW7 156 aa22.79■■□□□ 1.24
ACTN4-210ENST00000588618 SMIM14Q96QK8 99 aa22.79■■□□□ 1.24
ACTN4-210ENST00000588618 CCDC151A5D8V7 595 aa22.78■■□□□ 1.24
ACTN4-210ENST00000588618 E7ESA3 106 aa22.78■■□□□ 1.24
ACTN4-210ENST00000588618 FZD6O60353 706 aa22.78■■□□□ 1.24
ACTN4-210ENST00000588618 ADAM23O75077 832 aa22.78■■□□□ 1.24
ACTN4-210ENST00000588618 ATG13O75143 517 aa22.78■■□□□ 1.24
ACTN4-210ENST00000588618 ERLIN1O75477 346 aa22.78■■□□□ 1.24
ACTN4-210ENST00000588618 CPP00450 1065 aa22.78■■□□□ 1.24
ACTN4-210ENST00000588618 RPL26P61254 145 aaKnown RBP22.78■■□□□ 1.24
ACTN4-210ENST00000588618 BRD3Q15059 726 aa22.78■■□□□ 1.24
ACTN4-210ENST00000588618 ZNF805Q5CZA5 627 aa22.78■■□□□ 1.24
ACTN4-210ENST00000588618 SIRPB2Q5JXA9 342 aa22.78■■□□□ 1.24
ACTN4-210ENST00000588618 FBXO38Q6PIJ6 1188 aa22.78■■□□□ 1.24
ACTN4-210ENST00000588618 BRAT1Q6PJG6 821 aa22.78■■□□□ 1.24
ACTN4-210ENST00000588618 ZSWIM9Q86XI8 627 aa22.78■■□□□ 1.24
ACTN4-210ENST00000588618 MPP5Q8N3R9 675 aa22.78■■□□□ 1.24
ACTN4-210ENST00000588618 PIP4K2CQ8TBX8 421 aa22.78■■□□□ 1.24
ACTN4-210ENST00000588618 TXLNGYQ9BZA5 131 aa22.78■■□□□ 1.24
ACTN4-210ENST00000588618 PPM1HQ9ULR3 514 aa22.78■■□□□ 1.24
ACTN4-210ENST00000588618 MMP17Q9ULZ9 603 aa22.78■■□□□ 1.24
ACTN4-210ENST00000588618 RPL26L1Q9UNX3 145 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms