RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 TOR4AQ9NXH8 423 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 AMACRQ9UHK6 382 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 GGT7Q9UJ14 662 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 ITM2BQ9Y287 266 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 AKAP13Q12802 2813 aa10.6□□□□□ -0.71
TPM4-209ENST00000588483 MAP1BP46821 2468 aaKnown RBP10.59□□□□□ -0.71
TPM4-209ENST00000588483 A0A0A6YYK5 440 aaPredicted RBP10.59□□□□□ -0.71
TPM4-209ENST00000588483 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.59□□□□□ -0.71
TPM4-209ENST00000588483 SPAARA0A1B0GVQ0 90 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 A0A1W2PQ67 120 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 IGLON5A6NGN9 336 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 C3orf70A6NLC5 250 aaPredicted RBP10.59□□□□□ -0.71
TPM4-209ENST00000588483 KCNK3O14649 394 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 RIOK3O14730 519 aaKnown RBP10.59□□□□□ -0.71
TPM4-209ENST00000588483 RAD51BO15315 384 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 HTRA2O43464 458 aaPredicted RBP10.59□□□□□ -0.71
TPM4-209ENST00000588483 MFSD11O43934 449 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 SOCS5O75159 536 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 PAK4O96013 591 aaPredicted RBP10.59□□□□□ -0.71
TPM4-209ENST00000588483 KCNA4P22459 653 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 KDELR1P24390 212 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 GARSP41250 739 aaKnown RBP10.59□□□□□ -0.71
TPM4-209ENST00000588483 RABIFP47224 123 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 PFN3P60673 137 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 MMRN1Q13201 1228 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 RAB44Q7Z6P3 723 aaPredicted RBP10.59□□□□□ -0.71
TPM4-209ENST00000588483 ZSWIM9Q86XI8 627 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 CAMK1DQ8IU85 385 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 BBS5Q8N3I7 341 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 PQLC3Q8N755 202 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 KCTD6Q8NC69 237 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 OR13H1Q8NG92 308 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 SETD7Q8WTS6 366 aaKnown RBP10.59□□□□□ -0.71
TPM4-209ENST00000588483 ADAMTS14Q8WXS8 1223 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 MAML1Q92585 1016 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 KLK6Q92876 244 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 BMFQ96LC9 184 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 NSMCE3Q96MG7 304 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 TSGA13Q96PP4 275 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 NUDCD1Q96RS6 583 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 FZD3Q9NPG1 666 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 CA5BQ9Y2D0 317 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 BTBD3Q9Y2F9 522 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 ATP8A1Q9Y2Q0 1164 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 PCDHB9Q9Y5E1 797 aa10.59□□□□□ -0.71
TPM4-209ENST00000588483 SPTY2D1-AS1A0A0U1RR47 76 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 POM121BA6NF01 834 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 NEMP1O14524 444 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 FPGTO14772 594 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 TNFSF14O43557 240 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 TM7SF2O76062 418 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 FTH1P19P0C7X4 201 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 MX2P20592 715 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 CCNCP24863 283 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 SSR1P43307 286 aaKnown RBP10.58□□□□□ -0.72
TPM4-209ENST00000588483 CLDN2P57739 230 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 POLR2LP62875 67 aaKnown RBP10.58□□□□□ -0.72
TPM4-209ENST00000588483 BCL2L1Q07817 233 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 SGCGQ13326 291 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 ZNF235Q14590 738 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 MESDQ14696 234 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 MARC1Q5VT66 337 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 SLC9A4Q6AI14 798 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 TIGD7Q6NT04 549 aaPredicted RBP10.58□□□□□ -0.72
TPM4-209ENST00000588483 ERAP2Q6P179 960 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 PGBD5Q8N414 524 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 PLD5Q8N7P1 536 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 TP53I13Q8NBR0 393 aaPredicted RBP10.58□□□□□ -0.72
TPM4-209ENST00000588483 CXorf40AQ8TE69 158 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 RHBDD1Q8TEB9 315 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 RAPGEF5Q92565 580 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 HDAC11Q96DB2 347 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 RNF157Q96PX1 679 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 C1QTNF7Q9BXJ2 289 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 CALN1Q9BXU9 219 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 PCDH12Q9NPG4 1184 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 APOBEC2Q9Y235 224 aaKnown RBP10.58□□□□□ -0.72
TPM4-209ENST00000588483 NEUROG3Q9Y4Z2 214 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 USP24Q9UPU5 2620 aa10.58□□□□□ -0.72
TPM4-209ENST00000588483 GOLGA4Q13439 2230 aaKnown RBP10.57□□□□□ -0.72
TPM4-209ENST00000588483 MATN3O15232 486 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 MMP20O60882 483 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 CSF2P04141 144 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 ITGAVP06756 1048 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 NME1P15531 152 aaKnown RBP10.57□□□□□ -0.72
TPM4-209ENST00000588483 ITIH2P19823 946 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 CES1P23141 567 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 CYLC1P35663 651 aaPredicted RBP10.57□□□□□ -0.72
TPM4-209ENST00000588483 IGFALSP35858 605 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 MAGEA1P43355 309 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 MMP13P45452 471 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 SCNN1BP51168 640 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 YPEL5P62699 121 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 IL9RQ01113 521 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 RALGDSQ12967 914 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 BNIP3Q12983 259 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 FZD2Q14332 565 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 TAZQ16635 292 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 IFI16Q16666 785 aaKnown RBP10.57□□□□□ -0.72
TPM4-209ENST00000588483 LRRC73Q5JTD7 316 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms