RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 TSPAN11A1L157 253 aa17.13■□□□□ 0.33
TRIM47-203ENST00000586495 TPP1O14773 563 aa17.13■□□□□ 0.33
TRIM47-203ENST00000586495 LRCH4O75427 683 aa17.13■□□□□ 0.33
TRIM47-203ENST00000586495 NEBLO76041 1014 aa17.13■□□□□ 0.33
TRIM47-203ENST00000586495 ITIH2P19823 946 aa17.13■□□□□ 0.33
TRIM47-203ENST00000586495 PCK1P35558 622 aa17.13■□□□□ 0.33
TRIM47-203ENST00000586495 IGFALSP35858 605 aa17.13■□□□□ 0.33
TRIM47-203ENST00000586495 IL10RBQ08334 325 aa17.13■□□□□ 0.33
TRIM47-203ENST00000586495 EIF2B5Q13144 721 aaKnown RBP17.13■□□□□ 0.33
TRIM47-203ENST00000586495 DCBLD1Q8N8Z6 715 aa17.13■□□□□ 0.33
TRIM47-203ENST00000586495 TP53I13Q8NBR0 393 aaPredicted RBP17.13■□□□□ 0.33
TRIM47-203ENST00000586495 LMX1AQ8TE12 382 aa17.13■□□□□ 0.33
TRIM47-203ENST00000586495 HNRNPLLQ8WVV9 542 aaKnown RBP17.13■□□□□ 0.33
TRIM47-203ENST00000586495 TBATAQ96M53 351 aa17.13■□□□□ 0.33
TRIM47-203ENST00000586495 IL12RB2Q99665 862 aa17.13■□□□□ 0.33
TRIM47-203ENST00000586495 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.13■□□□□ 0.33
TRIM47-203ENST00000586495 CINPQ9BW66 212 aaPredicted RBP17.13■□□□□ 0.33
TRIM47-203ENST00000586495 ABCG4Q9H172 646 aa17.13■□□□□ 0.33
TRIM47-203ENST00000586495 ATP13A3Q9H7F0 1226 aa17.13■□□□□ 0.33
TRIM47-203ENST00000586495 APOBEC3BQ9UH17 382 aaKnown RBP17.13■□□□□ 0.33
TRIM47-203ENST00000586495 SALL4Q9UJQ4 1053 aa17.13■□□□□ 0.33
TRIM47-203ENST00000586495 WDFY3Q8IZQ1 3526 aa17.13■□□□□ 0.33
TRIM47-203ENST00000586495 PKD1L2Q7Z442 2459 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 A0A1W2PQJ5 194 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 SYCE3A1L190 88 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 TMEM110-MUSTN1A8MSY1 372 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 DFFAO00273 331 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 SERPINA4P29622 427 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 EIF4A3P38919 411 aaKnown RBP17.12■□□□□ 0.33
TRIM47-203ENST00000586495 ARL4AP40617 200 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 PEX5P50542 639 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 RENBPP51606 427 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 UBASH3AP57075 661 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 FANCCQ00597 558 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 NSUN2Q08J23 767 aaKnown RBP eCLIP17.12■□□□□ 0.33
TRIM47-203ENST00000586495 LRRC14Q15048 493 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 COL28A1Q2UY09 1125 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 BOLA3Q53S33 107 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 TPRG1LQ5T0D9 272 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 AFMIDQ63HM1 303 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 KDM7AQ6ZMT4 941 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 MACC1Q6ZN28 852 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 CYP4V2Q6ZWL3 525 aaPredicted RBP17.12■□□□□ 0.33
TRIM47-203ENST00000586495 SRLQ86TD4 932 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 ARHGAP12Q8IWW6 846 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 PHACTR4Q8IZ21 702 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 PAF1Q8N7H5 531 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 TSEN2Q8NCE0 465 aaKnown RBP17.12■□□□□ 0.33
TRIM47-203ENST00000586495 SYN2Q92777 582 aaPredicted RBP17.12■□□□□ 0.33
TRIM47-203ENST00000586495 GLMNQ92990 594 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 IQCDQ96DY2 449 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 SLC13A1Q9BZW2 595 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 CAAP1Q9H8G2 361 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 CBX8Q9HC52 389 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 PCDH12Q9NPG4 1184 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 MBNL1Q9NR56 388 aaKnown RBP17.12■□□□□ 0.33
TRIM47-203ENST00000586495 CWC15Q9P013 229 aaKnown RBP17.12■□□□□ 0.33
TRIM47-203ENST00000586495 KLF15Q9UIH9 416 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 CHD6Q8TD26 2715 aa17.12■□□□□ 0.33
TRIM47-203ENST00000586495 ADAMTS20P59510 1910 aa17.11■□□□□ 0.33
TRIM47-203ENST00000586495 A0A087WV48 116 aa17.11■□□□□ 0.33
TRIM47-203ENST00000586495 GOLGA6L19H0YKK7 550 aa17.11■□□□□ 0.33
TRIM47-203ENST00000586495 H3BRJ5 948 aa17.11■□□□□ 0.33
TRIM47-203ENST00000586495 OPA1O60313 960 aa17.11■□□□□ 0.33
TRIM47-203ENST00000586495 BUB1BO60566 1050 aaPredicted RBP17.11■□□□□ 0.33
TRIM47-203ENST00000586495 HTR1BP28222 390 aa17.11■□□□□ 0.33
TRIM47-203ENST00000586495 BLKP51451 505 aa17.11■□□□□ 0.33
TRIM47-203ENST00000586495 POLR2LP62875 67 aaKnown RBP17.11■□□□□ 0.33
TRIM47-203ENST00000586495 SEMG2Q02383 582 aa17.11■□□□□ 0.33
TRIM47-203ENST00000586495 PPARDQ03181 441 aa17.11■□□□□ 0.33
TRIM47-203ENST00000586495 BCL2L1Q07817 233 aa17.11■□□□□ 0.33
TRIM47-203ENST00000586495 PIGHQ14442 188 aaPredicted RBP17.11■□□□□ 0.33
TRIM47-203ENST00000586495 IRF4Q15306 451 aa17.11■□□□□ 0.33
TRIM47-203ENST00000586495 FAXCQ5TGI0 409 aa17.11■□□□□ 0.33
TRIM47-203ENST00000586495 CAMK1DQ8IU85 385 aa17.11■□□□□ 0.33
TRIM47-203ENST00000586495 DEPDC7Q96QD5 511 aa17.11■□□□□ 0.33
TRIM47-203ENST00000586495 ATP8A1Q9Y2Q0 1164 aa17.11■□□□□ 0.33
TRIM47-203ENST00000586495 ZZEF1O43149 2961 aa17.11■□□□□ 0.33
TRIM47-203ENST00000586495 FREM2Q5SZK8 3169 aa17.11■□□□□ 0.33
TRIM47-203ENST00000586495 MYLKQ15746 1914 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 LY6G6EA0A0G2JKS1 128 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 CFAP69A5D8W1 941 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 LZTS3O60299 673 aaPredicted RBP17.1■□□□□ 0.33
TRIM47-203ENST00000586495 SERPING1P05155 500 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 ANXA6P08133 673 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 C6P13671 934 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 RPIAP49247 311 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 DPYSQ14117 519 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 AGERQ15109 404 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 DPYSL2Q16555 572 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 WSCD2Q2TBF2 565 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 DEFB133Q30KQ1 61 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 PRRT3Q5FWE3 981 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 TMCO4Q5TGY1 634 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 LRRC69Q6ZNQ3 347 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 LUZP1Q86V48 1076 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 RBFAQ8N0V3 343 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 NPWQ8N729 165 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 ATL2Q8NHH9 583 aa17.1■□□□□ 0.33
TRIM47-203ENST00000586495 IFI44Q8TCB0 444 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms