RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 VIPAS39Q9H9C1 493 aa12.55□□□□□ -0.4
ERCC2-207ENST00000586441 GDF3Q9NR23 364 aa12.55□□□□□ -0.4
ERCC2-207ENST00000586441 AASDHPPTQ9NRN7 309 aa12.55□□□□□ -0.4
ERCC2-207ENST00000586441 HECAQ9UBI9 543 aaPredicted RBP12.55□□□□□ -0.4
ERCC2-207ENST00000586441 AP4E1Q9UPM8 1137 aa12.55□□□□□ -0.4
ERCC2-207ENST00000586441 FNDC3AQ9Y2H6 1198 aaKnown RBP12.55□□□□□ -0.4
ERCC2-207ENST00000586441 TMEM110-MUSTN1A8MSY1 372 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 RASA4BC9J798 803 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 RASA4O43374 803 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 TSPAN6O43657 245 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 LRCH4O75427 683 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 WNT1P04628 370 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 ADRB3P13945 408 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 COMTP21964 271 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 MIPP30301 263 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 CTNNA1P35221 906 aaKnown RBP12.54□□□□□ -0.4
ERCC2-207ENST00000586441 GRK6P43250 576 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 CSNK1DP48730 415 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 ARRB1P49407 418 aaPredicted RBP12.54□□□□□ -0.4
ERCC2-207ENST00000586441 NXPH1P58417 271 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 PPP2CBP62714 309 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 RPS21P63220 83 aaKnown RBP12.54□□□□□ -0.4
ERCC2-207ENST00000586441 PPP2CAP67775 309 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 TMCO4Q5TGY1 634 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 AFMIDQ63HM1 303 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 KIAA1161Q6NSJ0 714 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 EMBQ6PCB8 327 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 FBXL19Q6PCT2 694 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 CYP4V2Q6ZWL3 525 aaPredicted RBP12.54□□□□□ -0.4
ERCC2-207ENST00000586441 DCP2Q8IU60 420 aaKnown RBP12.54□□□□□ -0.4
ERCC2-207ENST00000586441 TMEM145Q8NBT3 493 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 MAIP1Q8WWC4 291 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 ARRDC3Q96B67 414 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 IFT43Q96FT9 208 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 SLC6A18Q96N87 628 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 RUNDC3BQ96NL0 473 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 KRT12Q99456 494 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 IL21RQ9HBE5 538 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 SMARCAL1Q9NZC9 954 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 DKK3Q9UBP4 350 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 IP6K2Q9UHH9 426 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 APOBEC2Q9Y235 224 aaKnown RBP12.54□□□□□ -0.4
ERCC2-207ENST00000586441 FCF1Q9Y324 198 aaKnown RBP12.54□□□□□ -0.4
ERCC2-207ENST00000586441 HS3ST3A1Q9Y663 406 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 TMEM131Q92545 1883 aa12.54□□□□□ -0.4
ERCC2-207ENST00000586441 KNTC1P50748 2209 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 ARHGAP42A6NI28 874 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 H0Y8X5 98 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 MYO1FO00160 1098 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 EEF2KO00418 725 aaKnown RBP12.53□□□□□ -0.4
ERCC2-207ENST00000586441 HEXIM1O94992 359 aaKnown RBP12.53□□□□□ -0.4
ERCC2-207ENST00000586441 CDK4P11802 303 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 KCNA4P22459 653 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 HNRNPA2B1P22626 353 aaKnown RBP12.53□□□□□ -0.4
ERCC2-207ENST00000586441 RWDD2BP57060 319 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 NSUN2Q08J23 767 aaKnown RBP eCLIP12.53□□□□□ -0.4
ERCC2-207ENST00000586441 RFTN1Q14699 578 aaPredicted RBP12.53□□□□□ -0.4
ERCC2-207ENST00000586441 CASP8Q14790 479 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 DPYSL2Q16555 572 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 ZNF284Q2VY69 593 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 TMEM259Q4ZIN3 620 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 KCNT1Q5JUK3 1230 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 RFX8Q6ZV50 586 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 TEKT4Q8WW24 435 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 ADAMTS14Q8WXS8 1223 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 VOPP1Q96AW1 172 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 HMCESQ96FZ2 354 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 GDAP1L1Q96MZ0 367 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 LENG8Q96PV6 779 aaPredicted RBP12.53□□□□□ -0.4
ERCC2-207ENST00000586441 SNRNP25Q9BV90 132 aaKnown RBP12.53□□□□□ -0.4
ERCC2-207ENST00000586441 DHX35Q9H5Z1 703 aaKnown RBP12.53□□□□□ -0.4
ERCC2-207ENST00000586441 ZWILCHQ9H900 591 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 ANAPC7Q9UJX3 599 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.53□□□□□ -0.4
ERCC2-207ENST00000586441 NEUROG3Q9Y4Z2 214 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 PCDHA3Q9Y5H8 950 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 FADS3Q9Y5Q0 445 aa12.53□□□□□ -0.4
ERCC2-207ENST00000586441 COL5A1P20908 1838 aaPredicted RBP12.53□□□□□ -0.4
ERCC2-207ENST00000586441 TP53BP1Q12888 1972 aaPredicted RBP12.52□□□□□ -0.4
ERCC2-207ENST00000586441 CHD8Q9HCK8 2581 aa12.52□□□□□ -0.4
ERCC2-207ENST00000586441 ARID1BQ8NFD5 2236 aaPredicted RBP12.52□□□□□ -0.41
ERCC2-207ENST00000586441 A0A1W2PQU0 124 aa12.52□□□□□ -0.41
ERCC2-207ENST00000586441 PLK4O00444 970 aa12.52□□□□□ -0.41
ERCC2-207ENST00000586441 DAPK3O43293 454 aa12.52□□□□□ -0.41
ERCC2-207ENST00000586441 ATMINO43313 823 aaPredicted RBP12.52□□□□□ -0.41
ERCC2-207ENST00000586441 TNFSF14O43557 240 aa12.52□□□□□ -0.41
ERCC2-207ENST00000586441 PRAMEF11O60813 436 aa12.52□□□□□ -0.41
ERCC2-207ENST00000586441 TMCC1O94876 653 aa12.52□□□□□ -0.41
ERCC2-207ENST00000586441 DKK1O94907 266 aa12.52□□□□□ -0.41
ERCC2-207ENST00000586441 FGGP02679 453 aa12.52□□□□□ -0.41
ERCC2-207ENST00000586441 ERCC2P18074 760 aa12.52□□□□□ -0.41
ERCC2-207ENST00000586441 AKT2P31751 481 aa12.52□□□□□ -0.41
ERCC2-207ENST00000586441 MAN1A1P33908 653 aa12.52□□□□□ -0.41
ERCC2-207ENST00000586441 TNNT3P45378 269 aaPredicted RBP12.52□□□□□ -0.41
ERCC2-207ENST00000586441 CUL1Q13616 776 aa12.52□□□□□ -0.41
ERCC2-207ENST00000586441 GDPD4Q6W3E5 623 aa12.52□□□□□ -0.41
ERCC2-207ENST00000586441 RAB44Q7Z6P3 723 aaPredicted RBP12.52□□□□□ -0.41
ERCC2-207ENST00000586441 LRRC49Q8IUZ0 686 aa12.52□□□□□ -0.41
ERCC2-207ENST00000586441 GRIN3AQ8TCU5 1115 aa12.52□□□□□ -0.41
ERCC2-207ENST00000586441 RHBDD1Q8TEB9 315 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms