RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ASMTLO95671 621 aa20.63■□□□□ 0.89
ATG4D-204ENST00000586417 ARSAP15289 507 aa20.63■□□□□ 0.89
ATG4D-204ENST00000586417 CA4P22748 312 aa20.63■□□□□ 0.89
ATG4D-204ENST00000586417 CSKP41240 450 aa20.63■□□□□ 0.89
ATG4D-204ENST00000586417 FCHO2Q0JRZ9 810 aa20.63■□□□□ 0.89
ATG4D-204ENST00000586417 CDH18Q13634 790 aa20.63■□□□□ 0.89
ATG4D-204ENST00000586417 SLC14A2Q15849 920 aa20.63■□□□□ 0.89
ATG4D-204ENST00000586417 MPPE1Q53F39 396 aa20.63■□□□□ 0.89
ATG4D-204ENST00000586417 LY6G5CQ5SRR4 150 aa20.63■□□□□ 0.89
ATG4D-204ENST00000586417 ARMC3Q5W041 872 aa20.63■□□□□ 0.89
ATG4D-204ENST00000586417 PPHLN1Q8NEY8 458 aaKnown RBP20.63■□□□□ 0.89
ATG4D-204ENST00000586417 DDI1Q8WTU0 396 aa20.63■□□□□ 0.89
ATG4D-204ENST00000586417 FAM83CQ9BQN1 747 aa20.63■□□□□ 0.89
ATG4D-204ENST00000586417 EBF3Q9H4W6 596 aa20.63■□□□□ 0.89
ATG4D-204ENST00000586417 OTOL1A6NHN0 477 aaPredicted RBP20.62■□□□□ 0.89
ATG4D-204ENST00000586417 ECI2O75521 394 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 ADRA1DP25100 572 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 CNTFP26441 200 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 SIRPB2Q5JXA9 342 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 TEDDM1Q5T9Z0 273 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 TIFABQ6ZNK6 161 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 KCNMB4Q86W47 210 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 MFN1Q8IWA4 741 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 CKAP2Q8WWK9 683 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 IRF7Q92985 503 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 E2F7Q96AV8 911 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 FEM1CQ96JP0 617 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 RANBP9Q96S59 729 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 NOD2Q9HC29 1040 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 SPHK2Q9NRA0 654 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 TREX1Q9NSU2 369 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 HAUS2Q9NVX0 235 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 LIMD1Q9UGP4 676 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 CLEC4EQ9ULY5 219 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 CCDC78A2IDD5 438 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 PYGBP11216 843 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 PSMC3P17980 439 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 CCNFP41002 786 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 SERPINH1P50454 418 aaKnown RBP20.62■□□□□ 0.89
ATG4D-204ENST00000586417 HSP90AA5PQ58FG0 334 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 MROH9Q5TGP6 573 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 FYB2Q5VWT5 728 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 LINGO4Q6UY18 593 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 MTSS1LQ765P7 747 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 DCAF4L2Q8NA75 395 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 GDAP1Q8TB36 358 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 TRIB3Q96RU7 358 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 CCT8L2Q96SF2 557 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 AGAP2Q99490 1192 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 CPNE1Q99829 537 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 C20orf96Q9NUD7 363 aaPredicted RBP20.62■□□□□ 0.89
ATG4D-204ENST00000586417 VPS51Q9UID3 782 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 VPS28Q9UK41 221 aa20.62■□□□□ 0.89
ATG4D-204ENST00000586417 SLC9A3R1O14745 358 aaPredicted RBP20.61■□□□□ 0.89
ATG4D-204ENST00000586417 FAM107AO95990 144 aa20.61■□□□□ 0.89
ATG4D-204ENST00000586417 EPOP01588 193 aa20.61■□□□□ 0.89
ATG4D-204ENST00000586417 CYP17A1P05093 508 aa20.61■□□□□ 0.89
ATG4D-204ENST00000586417 SERPINF2P08697 491 aa20.61■□□□□ 0.89
ATG4D-204ENST00000586417 ARNTP27540 789 aa20.61■□□□□ 0.89
ATG4D-204ENST00000586417 GP5P40197 560 aa20.61■□□□□ 0.89
ATG4D-204ENST00000586417 NEK3P51956 506 aa20.61■□□□□ 0.89
ATG4D-204ENST00000586417 CDK18Q07002 472 aa20.61■□□□□ 0.89
ATG4D-204ENST00000586417 DMTNQ08495 405 aa20.61■□□□□ 0.89
ATG4D-204ENST00000586417 ESRP1Q6NXG1 681 aaKnown RBP20.61■□□□□ 0.89
ATG4D-204ENST00000586417 OTUB2Q96DC9 234 aa20.61■□□□□ 0.89
ATG4D-204ENST00000586417 APOPT1Q96IL0 206 aa20.61■□□□□ 0.89
ATG4D-204ENST00000586417 EXOC2Q96KP1 924 aa20.61■□□□□ 0.89
ATG4D-204ENST00000586417 HPS4Q9NQG7 708 aa20.61■□□□□ 0.89
ATG4D-204ENST00000586417 THG1LQ9NWX6 298 aaKnown RBP20.61■□□□□ 0.89
ATG4D-204ENST00000586417 SLC2A6Q9UGQ3 507 aa20.61■□□□□ 0.89
ATG4D-204ENST00000586417 VCANP13611 3396 aa20.6■□□□□ 0.89
ATG4D-204ENST00000586417 ERICH4A6NGS2 130 aa20.6■□□□□ 0.89
ATG4D-204ENST00000586417 TMCC1O94876 653 aa20.6■□□□□ 0.89
ATG4D-204ENST00000586417 ZWINTO95229 277 aa20.6■□□□□ 0.89
ATG4D-204ENST00000586417 GDI1P31150 447 aa20.6■□□□□ 0.89
ATG4D-204ENST00000586417 ARCN1P48444 511 aaKnown RBP20.6■□□□□ 0.89
ATG4D-204ENST00000586417 DHCR24Q15392 516 aa20.6■□□□□ 0.89
ATG4D-204ENST00000586417 INO80DQ53TQ3 878 aaPredicted RBP20.6■□□□□ 0.89
ATG4D-204ENST00000586417 PDPK2PQ6A1A2 396 aa20.6■□□□□ 0.89
ATG4D-204ENST00000586417 APCDD1Q8J025 514 aa20.6■□□□□ 0.89
ATG4D-204ENST00000586417 KIAA1958Q8N8K9 716 aa20.6■□□□□ 0.89
ATG4D-204ENST00000586417 FIBINQ8TAL6 211 aa20.6■□□□□ 0.89
ATG4D-204ENST00000586417 DYDC1Q8WWB3 177 aa20.6■□□□□ 0.89
ATG4D-204ENST00000586417 ATP2A3Q93084 1043 aa20.6■□□□□ 0.89
ATG4D-204ENST00000586417 CHMP6Q96FZ7 201 aa20.6■□□□□ 0.89
ATG4D-204ENST00000586417 MCMBPQ9BTE3 642 aa20.6■□□□□ 0.89
ATG4D-204ENST00000586417 BBS2Q9BXC9 721 aa20.6■□□□□ 0.89
ATG4D-204ENST00000586417 HEATR9A2RTY3 570 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 NEDD8-MDP1E9PL57 170 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 INSIG1O15503 277 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 HLA-DPA1P20036 260 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 DRD4P21917 467 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 DNAJC3Q13217 504 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 SEPT6Q14141 434 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 AAK1Q2M2I8 961 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 GRTP1Q5TC63 336 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 YAF2Q8IY57 180 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 TTC8Q8TAM2 541 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 TCP10LQ8TDR4 215 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 NUDCD1Q96RS6 583 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms