RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 SLC35G2Q8TBE7 412 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 HCAR2Q8TDS4 363 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 ECHDC3Q96DC8 303 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 SERAC1Q96JX3 654 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 EXOC2Q96KP1 924 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 PSKH2Q96QS6 385 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 DYRK4Q9NR20 520 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 TM7SF3Q9NS93 570 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 IPO11Q9UI26 975 aaKnown RBP8.74□□□□□ -1.01
ATG4D-202ENST00000585437 SNX12Q9UMY4 172 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 WASF3Q9UPY6 502 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 CAPN6Q9Y6Q1 641 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 ARID1BQ8NFD5 2236 aaPredicted RBP8.74□□□□□ -1.01
ATG4D-202ENST00000585437 CEP295Q9C0D2 2601 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 ZNF106Q9H2Y7 1883 aaKnown RBP8.74□□□□□ -1.01
ATG4D-202ENST00000585437 PLXNB3Q9ULL4 1909 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 FRYQ5TBA9 3013 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 C3orf70A6NLC5 250 aaPredicted RBP8.73□□□□□ -1.01
ATG4D-202ENST00000585437 PRAMEF26H0Y7S4 382 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 H0Y8X5 98 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 MUSKO15146 869 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 INSIG1O15503 277 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 DAPK3O43293 454 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 TSPAN6O43657 245 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 MFSD11O43934 449 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 DFNA5O60443 496 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 KRT7P08729 469 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 CR2P20023 1033 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 HNRNPA2B1P22626 353 aaKnown RBP8.73□□□□□ -1.01
ATG4D-202ENST00000585437 PMLP29590 882 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 MAT2AP31153 395 aaKnown RBP8.73□□□□□ -1.01
ATG4D-202ENST00000585437 PAFAH1B1P43034 410 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 NOVA1P51513 510 aaKnown RBP8.73□□□□□ -1.01
ATG4D-202ENST00000585437 SUOXP51687 545 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 NXPH1P58417 271 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 RAD51Q06609 339 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 NSUN2Q08J23 767 aaKnown RBP eCLIP8.73□□□□□ -1.01
ATG4D-202ENST00000585437 GALNT2Q10471 571 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 MMRN1Q13201 1228 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 FGL2Q14314 439 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 PDK2Q15119 407 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 SHBQ15464 509 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 ATP13A4Q4VNC1 1196 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 TMCO4Q5TGY1 634 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 CCDC181Q5TID7 509 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 LRRC38Q5VT99 294 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 SEL1L3Q68CR1 1132 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 PSAPL1Q6NUJ1 521 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 FBXL19Q6PCT2 694 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 GDPD4Q6W3E5 623 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 GCNT7Q6ZNI0 430 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 KANSL1Q7Z3B3 1105 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 ZNF572Q7Z3I7 529 aaPredicted RBP8.73□□□□□ -1.01
ATG4D-202ENST00000585437 ABI3BPQ7Z7G0 1075 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 GLRX5Q86SX6 157 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 SPATS2Q86XZ4 545 aaKnown RBP8.73□□□□□ -1.01
ATG4D-202ENST00000585437 NAXDQ8IW45 347 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 NETO2Q8NC67 525 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 TSEN2Q8NCE0 465 aaKnown RBP8.73□□□□□ -1.01
ATG4D-202ENST00000585437 LRRN4CLQ8ND94 238 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 DEFB124Q8NES8 71 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 PCDH19Q8TAB3 1148 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 ASB12Q8WXK4 309 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 FATE1Q969F0 183 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 NSMCE3Q96MG7 304 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 ZNF641Q96N77 438 aaPredicted RBP8.73□□□□□ -1.01
ATG4D-202ENST00000585437 KLHL32Q96NJ5 620 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 TUBGCP5Q96RT8 1024 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 C1QTNF2Q9BXJ5 285 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 ERVMER34-1Q9H9K5 563 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 SP110Q9HB58 689 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 GGT7Q9UJ14 662 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 ITM2BQ9Y287 266 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 CHD8Q9HCK8 2581 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 AKAP13Q12802 2813 aa8.73□□□□□ -1.01
ATG4D-202ENST00000585437 MYLKQ15746 1914 aa8.72□□□□□ -1.01
ATG4D-202ENST00000585437 ZFC3H1O60293 1989 aaKnown RBP8.72□□□□□ -1.01
ATG4D-202ENST00000585437 A0A1B0GTQ1 180 aa8.72□□□□□ -1.01
ATG4D-202ENST00000585437 GRID2IPA4D2P6 1211 aa8.72□□□□□ -1.01
ATG4D-202ENST00000585437 DFFAO00273 331 aa8.72□□□□□ -1.01
ATG4D-202ENST00000585437 CES2O00748 559 aa8.72□□□□□ -1.01
ATG4D-202ENST00000585437 TRAFD1O14545 582 aaPredicted RBP8.72□□□□□ -1.01
ATG4D-202ENST00000585437 ENC1O14682 589 aa8.72□□□□□ -1.01
ATG4D-202ENST00000585437 FLRT2O43155 660 aa8.72□□□□□ -1.01
ATG4D-202ENST00000585437 BUB1BO60566 1050 aaPredicted RBP8.72□□□□□ -1.01
ATG4D-202ENST00000585437 PALMO75781 387 aa8.72□□□□□ -1.01
ATG4D-202ENST00000585437 PIGNO95427 931 aa8.72□□□□□ -1.01
ATG4D-202ENST00000585437 HSPA9P38646 679 aaKnown RBP8.72□□□□□ -1.01
ATG4D-202ENST00000585437 MMP12P39900 470 aa8.72□□□□□ -1.01
ATG4D-202ENST00000585437 GARSP41250 739 aaKnown RBP8.72□□□□□ -1.01
ATG4D-202ENST00000585437 CCT8P50990 548 aa8.72□□□□□ -1.01
ATG4D-202ENST00000585437 AP1S1P61966 158 aa8.72□□□□□ -1.01
ATG4D-202ENST00000585437 RPS21P63220 83 aaKnown RBP8.72□□□□□ -1.01
ATG4D-202ENST00000585437 SHC2P98077 582 aa8.72□□□□□ -1.01
ATG4D-202ENST00000585437 SLC10A7Q0GE19 358 aa8.72□□□□□ -1.01
ATG4D-202ENST00000585437 HNRNPDQ14103 355 aaKnown RBP8.72□□□□□ -1.01
ATG4D-202ENST00000585437 KRT81Q14533 505 aa8.72□□□□□ -1.01
ATG4D-202ENST00000585437 MESDQ14696 234 aa8.72□□□□□ -1.01
ATG4D-202ENST00000585437 NAA30Q147X3 362 aaPredicted RBP8.72□□□□□ -1.01
ATG4D-202ENST00000585437 MAP9Q49MG5 647 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms