RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 EVA1BQ9NVM1 165 aa12.5□□□□□ -0.41
SS18-225ENST00000585121 RCOR3Q9P2K3 495 aaPredicted RBP12.5□□□□□ -0.41
SS18-225ENST00000585121 TRPM6Q9BX84 2022 aa12.5□□□□□ -0.41
SS18-225ENST00000585121 SPTY2D1-AS1A0A0U1RR47 76 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.49□□□□□ -0.41
SS18-225ENST00000585121 TSPAN11A1L157 253 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 TOR1BO14657 336 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 RFPL3O75679 317 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 PROSCO94903 275 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 CKMT2P17540 419 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 NFKBIAP25963 317 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 GJC1P36383 396 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 AP1S1P61966 158 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 YPEL5P62699 121 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 ZNF211Q13398 564 aaPredicted RBP12.49□□□□□ -0.41
SS18-225ENST00000585121 PDE1CQ14123 709 aaPredicted RBP12.49□□□□□ -0.41
SS18-225ENST00000585121 ZFYVE27Q5T4F4 411 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 CCNI2Q6ZMN8 369 aaPredicted RBP12.49□□□□□ -0.41
SS18-225ENST00000585121 PARGQ86W56 976 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 CAMK1DQ8IU85 385 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 CNGA4Q8IV77 575 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 SLC22A18ASQ8N1D0 253 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 KCTD6Q8NC69 237 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 ZCCHC14Q8WYQ9 949 aaKnown RBP12.49□□□□□ -0.41
SS18-225ENST00000585121 PSKH2Q96QS6 385 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 KLF6Q99612 283 aaPredicted RBP12.49□□□□□ -0.41
SS18-225ENST00000585121 WRAP53Q9BUR4 548 aaKnown RBP12.49□□□□□ -0.41
SS18-225ENST00000585121 PCDH12Q9NPG4 1184 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 ETNK2Q9NVF9 386 aa12.49□□□□□ -0.41
SS18-225ENST00000585121 TMEM131Q92545 1883 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 A0A1W2PQ67 120 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 RIOK3O14730 519 aaKnown RBP12.48□□□□□ -0.41
SS18-225ENST00000585121 SPINT1O43278 529 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 LZTS3O60299 673 aaPredicted RBP12.48□□□□□ -0.41
SS18-225ENST00000585121 BUB1BO60566 1050 aaPredicted RBP12.48□□□□□ -0.41
SS18-225ENST00000585121 PIAS2O75928 621 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 KRT7P08729 469 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 HNF1BP35680 557 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 RGRP47804 291 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 DAB2P98082 770 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 DNAJC3Q13217 504 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 ILKQ13418 452 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 LRRC14Q15048 493 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 PDK2Q15119 407 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 TXNRD3NBQ6F5E7 133 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 DHRS13Q6UX07 377 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 KANSL1Q7Z3B3 1105 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 TMPRSS12Q86WS5 348 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 SLC25A45Q8N413 288 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 BTN2A2Q8WVV5 523 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 VOPP1Q96AW1 172 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 CENPTQ96BT3 561 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 DUSP23Q9BVJ7 150 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 TMEM121BQ9BXQ6 578 aaPredicted RBP12.48□□□□□ -0.41
SS18-225ENST00000585121 SCUBE2Q9NQ36 999 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 ABHD10Q9NUJ1 306 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 HAUS2Q9NVX0 235 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 NENFQ9UMX5 172 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 ATP8A1Q9Y2Q0 1164 aa12.48□□□□□ -0.41
SS18-225ENST00000585121 FRYQ5TBA9 3013 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 TMEM110-MUSTN1A8MSY1 372 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 FFAR2O15552 330 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 SIGLEC6O43699 453 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 MFAP3LO75121 409 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 NEBLO76041 1014 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 CSF2P04141 144 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 TMEM253P0C7T8 217 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 JUPP14923 745 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 NME1P15531 152 aaKnown RBP12.47□□□□□ -0.41
SS18-225ENST00000585121 ITIH2P19823 946 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 ACADVLP49748 655 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 ADKP55263 362 aaKnown RBP12.47□□□□□ -0.41
SS18-225ENST00000585121 PFN3P60673 137 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 SLC10A7Q0GE19 358 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 FZD2Q14332 565 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 SMAD1Q15797 465 aaKnown RBP12.47□□□□□ -0.41
SS18-225ENST00000585121 ZNF542PQ5EBM4 170 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 MARC1Q5VT66 337 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 OR4C6Q8NH72 309 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 TSC1Q92574 1164 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 NHEJ1Q9H9Q4 299 aaPredicted RBP12.47□□□□□ -0.41
SS18-225ENST00000585121 GPR27Q9NS67 375 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 NLGN3Q9NZ94 848 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 ZMIZ1Q9ULJ6 1067 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 IGF2RP11717 2491 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 CFAP69A5D8W1 941 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 GOLGA6L3A6NEY3 463 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 AKR1B15C9JRZ8 316 aaPredicted RBP12.47□□□□□ -0.41
SS18-225ENST00000585121 TRIM38O00635 465 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 SCAMP1O15126 338 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 MAFKO60675 156 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 C6P13671 934 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 JUNDP17535 347 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 MAN1A1P33908 653 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 MMP12P39900 470 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 LIG3P49916 1009 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 DUSP3P51452 185 aaPredicted RBP12.47□□□□□ -0.41
SS18-225ENST00000585121 ASTE1Q2TB18 679 aaPredicted RBP12.47□□□□□ -0.41
SS18-225ENST00000585121 RALGPS1Q5JS13 557 aa12.47□□□□□ -0.41
SS18-225ENST00000585121 TP53INP2Q8IXH6 220 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms