RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 ARF5P84085 180 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 SLC6A3Q01959 620 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 C1QBPQ07021 282 aaKnown RBP8.55□□□□□ -1.04
SRSF1-207ENST00000584668 SRSF6Q13247 344 aaKnown RBP8.55□□□□□ -1.04
SRSF1-207ENST00000584668 TRA2AQ13595 282 aaKnown RBP eCLIP8.55□□□□□ -1.045e-10■□□□□ 8.1
SRSF1-207ENST00000584668 IRF4Q15306 451 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 SKIDA1Q1XH10 827 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 KLHL40Q2TBA0 621 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 C14orf28Q4W4Y0 310 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 LACTB2Q53H82 288 aaPredicted RBP8.55□□□□□ -1.04
SRSF1-207ENST00000584668 TPRG1LQ5T0D9 272 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 SMYD5Q6GMV2 418 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 OLFML1Q6UWY5 402 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 GDPD4Q6W3E5 623 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 FAM183BPQ6ZVS7 135 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 TAF8Q7Z7C8 310 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 ZNF354CQ86Y25 554 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 ARHGEF19Q8IW93 802 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 TP53I13Q8NBR0 393 aaPredicted RBP8.55□□□□□ -1.04
SRSF1-207ENST00000584668 EHBP1Q8NDI1 1231 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 FAM46DQ8NEK8 389 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 ZNF397Q8NF99 534 aaPredicted RBP8.55□□□□□ -1.04
SRSF1-207ENST00000584668 OR7D4Q8NG98 312 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 HTR3CQ8WXA8 447 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 CASKIN2Q8WXE0 1202 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 SMARCE1Q969G3 411 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 PGAP3Q96FM1 320 aaPredicted RBP8.55□□□□□ -1.04
SRSF1-207ENST00000584668 KLHL32Q96NJ5 620 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 TEFMQ96QE5 360 aaKnown RBP8.55□□□□□ -1.04
SRSF1-207ENST00000584668 TAAR9Q96RI9 348 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 CPXM1Q96SM3 734 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 RBM15Q96T37 977 aaKnown RBP eCLIP8.55□□□□□ -1.042e-20■■□□□ 12.5
SRSF1-207ENST00000584668 DPYSL5Q9BPU6 564 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 INTS2Q9H0H0 1204 aaKnown RBP8.55□□□□□ -1.04
SRSF1-207ENST00000584668 PDCL3Q9H2J4 239 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 DPEP2Q9H4A9 486 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 UBE2TQ9NPD8 197 aaPredicted RBP8.55□□□□□ -1.04
SRSF1-207ENST00000584668 TMPRSS4Q9NRS4 437 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 PIGVQ9NUD9 493 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 MPP6Q9NZW5 540 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 LRIT1Q9P2V4 623 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 PPARGC1AQ9UBK2 798 aaKnown RBP8.55□□□□□ -1.04
SRSF1-207ENST00000584668 RABGEF1Q9UJ41 708 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 ITM2BQ9Y287 266 aa8.55□□□□□ -1.04
SRSF1-207ENST00000584668 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.55□□□□□ -1.04
SRSF1-207ENST00000584668 USP9YO00507 2555 aaPredicted RBP8.55□□□□□ -1.04
SRSF1-207ENST00000584668 USP9XQ93008 2570 aaPredicted RBP8.55□□□□□ -1.04
SRSF1-207ENST00000584668 BLACEA4D250 179 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 TRIM49BA6NDI0 452 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 RHPN2P1A8MT19 583 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 C9orf172C9J069 976 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 PDE2AO00408 941 aaPredicted RBP8.54□□□□□ -1.04
SRSF1-207ENST00000584668 MMP20O60882 483 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 FGFR1OPO95684 399 aaKnown RBP8.54□□□□□ -1.04
SRSF1-207ENST00000584668 CALCAP01258 141 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 CSTF2P33240 577 aaKnown RBP eCLIP8.54□□□□□ -1.04
SRSF1-207ENST00000584668 MAPKAPK2P49137 400 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 PPM1FP49593 454 aaPredicted RBP8.54□□□□□ -1.04
SRSF1-207ENST00000584668 PTK2Q05397 1052 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 KLRB1Q12918 225 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 MTM1Q13496 603 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 TAF5Q15542 800 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 TCEA2Q15560 299 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 ALG11Q2TAA5 492 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 SLC25A52Q3SY17 297 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 DCAF12Q5T6F0 453 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 PASD1Q8IV76 773 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 SLITRK4Q8IW52 837 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 DRC7Q8IY82 874 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 CACNA2D3Q8IZS8 1091 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 PAF1Q8N7H5 531 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 AGBL5Q8NDL9 886 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 GPR156Q8NFN8 814 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 OR6K2Q8NGY2 324 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 ARHGEF2Q92974 986 aaKnown RBP8.54□□□□□ -1.04
SRSF1-207ENST00000584668 TSACCQ96A04 125 aaPredicted RBP8.54□□□□□ -1.04
SRSF1-207ENST00000584668 DHTKD1Q96HY7 919 aaPredicted RBP8.54□□□□□ -1.04
SRSF1-207ENST00000584668 WRAP53Q9BUR4 548 aaKnown RBP8.54□□□□□ -1.04
SRSF1-207ENST00000584668 DDA1Q9BW61 102 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 SLC12A9Q9BXP2 914 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 CAAP1Q9H8G2 361 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 GPN2Q9H9Y4 310 aaPredicted RBP8.54□□□□□ -1.04
SRSF1-207ENST00000584668 DKK3Q9UBP4 350 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 PCDHGC3Q9UN70 934 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 PCDHGA3Q9Y5H0 932 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 DGKBQ9Y6T7 804 aa8.54□□□□□ -1.04
SRSF1-207ENST00000584668 NBASA2RRP1 2371 aa8.53□□□□□ -1.04
SRSF1-207ENST00000584668 CLEC18AA5D8T8 446 aa8.53□□□□□ -1.04
SRSF1-207ENST00000584668 GOLGA6L4A6NEF3 574 aa8.53□□□□□ -1.04
SRSF1-207ENST00000584668 AGRPO00253 132 aa8.53□□□□□ -1.04
SRSF1-207ENST00000584668 AREL1O15033 823 aa8.53□□□□□ -1.04
SRSF1-207ENST00000584668 RAMP2O60895 175 aa8.53□□□□□ -1.04
SRSF1-207ENST00000584668 VPS4BO75351 444 aa8.53□□□□□ -1.04
SRSF1-207ENST00000584668 ZNF821O75541 412 aaPredicted RBP8.53□□□□□ -1.04
SRSF1-207ENST00000584668 ZMPSTE24O75844 475 aa8.53□□□□□ -1.04
SRSF1-207ENST00000584668 AGFG2O95081 481 aa8.53□□□□□ -1.04
SRSF1-207ENST00000584668 PCCBP05166 539 aa8.53□□□□□ -1.04
SRSF1-207ENST00000584668 CELA2BP08218 269 aaPredicted RBP8.53□□□□□ -1.04
SRSF1-207ENST00000584668 LIFP15018 202 aa8.53□□□□□ -1.04
SRSF1-207ENST00000584668 SCNN1AP37088 669 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms