RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 KYAT3Q6YP21 454 aaKnown RBP20.62■□□□□ 0.89
SS18-224ENST00000584083 RAB44Q7Z6P3 723 aaPredicted RBP20.62■□□□□ 0.89
SS18-224ENST00000584083 DCP2Q8IU60 420 aaKnown RBP20.62■□□□□ 0.89
SS18-224ENST00000584083 MAP7D3Q8IWC1 876 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 BBS5Q8N3I7 341 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 FAM71BQ8TC56 605 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 ADAMTS14Q8WXS8 1223 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 PSKH2Q96QS6 385 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 KLF6Q99612 283 aaPredicted RBP20.62■□□□□ 0.89
SS18-224ENST00000584083 C1QTNF7Q9BXJ2 289 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 PCDH12Q9NPG4 1184 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 CHD8Q9HCK8 2581 aa20.62■□□□□ 0.89
SS18-224ENST00000584083 TSPAN11A1L157 253 aa20.61■□□□□ 0.89
SS18-224ENST00000584083 MUSKO15146 869 aa20.61■□□□□ 0.89
SS18-224ENST00000584083 MAFKO60675 156 aa20.61■□□□□ 0.89
SS18-224ENST00000584083 LDOC1O95751 146 aaPredicted RBP20.61■□□□□ 0.89
SS18-224ENST00000584083 ERAP2Q6P179 960 aa20.61■□□□□ 0.89
SS18-224ENST00000584083 RHOT2Q8IXI1 618 aa20.61■□□□□ 0.89
SS18-224ENST00000584083 RBSNQ9H1K0 784 aa20.61■□□□□ 0.89
SS18-224ENST00000584083 KLK13Q9UKR3 277 aa20.61■□□□□ 0.89
SS18-224ENST00000584083 NEUROG3Q9Y4Z2 214 aa20.61■□□□□ 0.89
SS18-224ENST00000584083 COL5A1P20908 1838 aaPredicted RBP20.6■□□□□ 0.89
SS18-224ENST00000584083 ARID1BQ8NFD5 2236 aaPredicted RBP20.6■□□□□ 0.89
SS18-224ENST00000584083 HSPA9P38646 679 aaKnown RBP20.6■□□□□ 0.89
SS18-224ENST00000584083 RABIFP47224 123 aa20.6■□□□□ 0.89
SS18-224ENST00000584083 AP1S1P61966 158 aa20.6■□□□□ 0.89
SS18-224ENST00000584083 TMEM52BQ4KMG9 183 aa20.6■□□□□ 0.89
SS18-224ENST00000584083 ANKRD20A8PQ5CZ79 823 aa20.6■□□□□ 0.89
SS18-224ENST00000584083 SLC22A18ASQ8N1D0 253 aa20.6■□□□□ 0.89
SS18-224ENST00000584083 DENND6BQ8NEG7 585 aa20.6■□□□□ 0.89
SS18-224ENST00000584083 PCDH19Q8TAB3 1148 aa20.6■□□□□ 0.89
SS18-224ENST00000584083 CNDP2Q96KP4 475 aaKnown RBP20.6■□□□□ 0.89
SS18-224ENST00000584083 ZNF670Q9BS34 389 aa20.6■□□□□ 0.89
SS18-224ENST00000584083 ATP8A1Q9Y2Q0 1164 aa20.6■□□□□ 0.89
SS18-224ENST00000584083 PTPRBP23467 1997 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 TTC24A2A3L6 582 aaPredicted RBP20.59■□□□□ 0.89
SS18-224ENST00000584083 ENC1O14682 589 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 RIOK3O14730 519 aaKnown RBP20.59■□□□□ 0.89
SS18-224ENST00000584083 MFSD11O43934 449 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 PEX11BO96011 259 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 PRKCGP05129 697 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 ARHGAP25P42331 645 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 SEMG2Q02383 582 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 ZNF542PQ5EBM4 170 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 MARC1Q5VT66 337 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 KANSL1Q7Z3B3 1105 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 ZSWIM9Q86XI8 627 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 LRRC49Q8IUZ0 686 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 TC2NQ8N9U0 490 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 RFFLQ8WZ73 363 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 CENPTQ96BT3 561 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 ANP32EQ9BTT0 268 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 SCUBE2Q9NQ36 999 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 DNAJC28Q9NX36 388 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 TOR4AQ9NXH8 423 aa20.59■□□□□ 0.89
SS18-224ENST00000584083 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.58■□□□□ 0.89
SS18-224ENST00000584083 MMP13P45452 471 aa20.58■□□□□ 0.89
SS18-224ENST00000584083 POLR2LP62875 67 aaKnown RBP20.58■□□□□ 0.89
SS18-224ENST00000584083 PDE1CQ14123 709 aaPredicted RBP20.58■□□□□ 0.89
SS18-224ENST00000584083 PAFAH1B3Q15102 231 aaKnown RBP20.58■□□□□ 0.89
SS18-224ENST00000584083 NCBP2-AS2Q69YL0 99 aa20.58■□□□□ 0.89
SS18-224ENST00000584083 KDM7AQ6ZMT4 941 aa20.58■□□□□ 0.89
SS18-224ENST00000584083 PGBD5Q8N414 524 aa20.58■□□□□ 0.89
SS18-224ENST00000584083 ECHDC3Q96DC8 303 aa20.58■□□□□ 0.89
SS18-224ENST00000584083 IFT43Q96FT9 208 aa20.58■□□□□ 0.89
SS18-224ENST00000584083 INTUQ9ULD6 942 aa20.58■□□□□ 0.89
SS18-224ENST00000584083 COQ6Q9Y2Z9 468 aa20.58■□□□□ 0.89
SS18-224ENST00000584083 CEP295Q9C0D2 2601 aa20.58■□□□□ 0.89
SS18-224ENST00000584083 LZTS3O60299 673 aaPredicted RBP20.57■□□□□ 0.88
SS18-224ENST00000584083 MTA2O94776 668 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 MAP3K6O95382 1288 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 C6P13671 934 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 DGKAP23743 735 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 IGFALSP35858 605 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 MAGEA1P43355 309 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 LIG3P49916 1009 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 ZNF75DP51815 510 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 THOP1P52888 689 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 PFN3P60673 137 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 MAXP61244 160 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 GALNT2Q10471 571 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 FZD2Q14332 565 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 PDCD6IPQ8WUM4 868 aaKnown RBP20.57■□□□□ 0.88
SS18-224ENST00000584083 RAPGEF5Q92565 580 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 NSMCE3Q96MG7 304 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 NUDCD1Q96RS6 583 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 NOD2Q9HC29 1040 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 NT5MQ9NPB1 228 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 GPR27Q9NS67 375 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 UCKL1Q9NWZ5 548 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 MSRB2Q9Y3D2 182 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 PCDHGC4Q9Y5F7 938 aa20.57■□□□□ 0.88
SS18-224ENST00000584083 MAP1BP46821 2468 aaKnown RBP20.56■□□□□ 0.88
SS18-224ENST00000584083 SPTY2D1-AS1A0A0U1RR47 76 aa20.56■□□□□ 0.88
SS18-224ENST00000584083 LRRD1A4D1F6 860 aa20.56■□□□□ 0.88
SS18-224ENST00000584083 C1QTNF9BB2RNN3 333 aa20.56■□□□□ 0.88
SS18-224ENST00000584083 FFAR2O15552 330 aa20.56■□□□□ 0.88
SS18-224ENST00000584083 PIAS2O75928 621 aa20.56■□□□□ 0.88
SS18-224ENST00000584083 C1QTNF9P0C862 333 aa20.56■□□□□ 0.88
SS18-224ENST00000584083 KDELR1P24390 212 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms