RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 KCNJ11Q14654 390 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 CST6Q15828 149 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 FAM182AQ5T1J6 154 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 CFAP58Q5T655 872 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 FAXCQ5TGI0 409 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 DUPD1Q68J44 220 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 NAPEPLDQ6IQ20 393 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 WDR93Q6P2C0 686 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 LINC00523Q86TU6 105 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 HOOK3Q86VS8 718 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 TMPRSS6Q8IU80 811 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 CAMK1DQ8IU85 385 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 PPIL6Q8IXY8 311 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 NDUFAF2Q8N183 169 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 FBXL6Q8N531 539 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 CAMKK1Q8N5S9 505 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 PDCD7Q8N8D1 485 aaKnown RBP11.76□□□□□ -0.53
CDRT1-207ENST00000583965 TSTD1Q8NFU3 115 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 PRCCQ92733 491 aaPredicted RBP11.76□□□□□ -0.53
CDRT1-207ENST00000583965 ECHDC3Q96DC8 303 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 IFT43Q96FT9 208 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 SNF8Q96H20 258 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 MRGPRX2Q96LB1 330 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 NSMCE3Q96MG7 304 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 KLHL32Q96NJ5 620 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 ADGRE3Q9BY15 652 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 MKRN2Q9H000 416 aaKnown RBP11.76□□□□□ -0.53
CDRT1-207ENST00000583965 DYRK4Q9NR20 520 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 UBP1Q9NZI7 540 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 WHRNQ9P202 907 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 TPX2Q9ULW0 747 aaKnown RBP11.76□□□□□ -0.53
CDRT1-207ENST00000583965 PCDHGC4Q9Y5F7 938 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 PLXNA2O75051 1894 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 ZNF106Q9H2Y7 1883 aaKnown RBP11.76□□□□□ -0.53
CDRT1-207ENST00000583965 LOC285095A0A1B0GVY8 99 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 F5H423 210 aaPredicted RBP11.75□□□□□ -0.53
CDRT1-207ENST00000583965 AP3B1O00203 1094 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 PI15O43692 258 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 SUN1O94901 812 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 SEC31AO94979 1220 aaKnown RBP11.75□□□□□ -0.53
CDRT1-207ENST00000583965 HEXIM1O94992 359 aaKnown RBP11.75□□□□□ -0.53
CDRT1-207ENST00000583965 PGLSO95336 258 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 SLC34A2O95436 690 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 APBB3O95704 486 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 NDST3O95803 873 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 CPP00450 1065 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 DNTTP04053 509 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 ACADMP11310 421 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 GABRG2P18507 467 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 ITIH2P19823 946 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 HLA-DPA1P20036 260 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 MCM3P25205 808 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 SLC8A1P32418 973 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 ADRA1AP35348 466 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 PSMD8P48556 350 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 RPS14P62263 151 aaKnown RBP11.75□□□□□ -0.53
CDRT1-207ENST00000583965 CALCOCO2Q13137 446 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 MORF4L2Q15014 288 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 PCSK7Q16549 785 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 TTC31Q49AM3 519 aaPredicted RBP11.75□□□□□ -0.53
CDRT1-207ENST00000583965 RNASEH2BQ5TBB1 312 aaKnown RBP11.75□□□□□ -0.53
CDRT1-207ENST00000583965 IZUMO3Q5VZ72 239 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 RANBP10Q6VN20 620 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 USP30Q70CQ3 517 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 TAB3Q8N5C8 712 aaPredicted RBP11.75□□□□□ -0.53
CDRT1-207ENST00000583965 PAF1Q8N7H5 531 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 MCUQ8NE86 351 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 IPMKQ8NFU5 416 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 SEC14L1Q92503 715 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 CPT1BQ92523 772 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 SIPA1Q96FS4 1042 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 MRGPRX1Q96LB2 322 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 TRIB3Q96RU7 358 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 TBL1YQ9BQ87 522 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 FICDQ9BVA6 458 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 HDAC8Q9BY41 377 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 FAM129AQ9BZQ8 928 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 PABPC3Q9H361 631 aaKnown RBP11.75□□□□□ -0.53
CDRT1-207ENST00000583965 ARNT2Q9HBZ2 717 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 SARDHQ9UL12 918 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 PHTF1Q9UMS5 762 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 SHOC2Q9UQ13 582 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 CHKBQ9Y259 395 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 PPIL1Q9Y3C6 166 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 FANCMQ8IYD8 2048 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 ZNF318Q5VUA4 2279 aa11.75□□□□□ -0.53
CDRT1-207ENST00000583965 THADAQ6YHU6 1953 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 BHMG1C9JSJ3 638 aaPredicted RBP11.74□□□□□ -0.53
CDRT1-207ENST00000583965 MID1O15344 667 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 PRLP01236 227 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 FGF1P05230 155 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 NDUFV2P19404 249 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 TNFRSF8P28908 595 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 HOXA6P31267 233 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 RPL21P46778 160 aaKnown RBP11.74□□□□□ -0.53
CDRT1-207ENST00000583965 GRIA4P48058 902 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 NEK3P51956 506 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 EPHB1P54762 984 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 MRPS25P82663 173 aaKnown RBP11.74□□□□□ -0.53
CDRT1-207ENST00000583965 SLC7A5Q01650 507 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms