RNA–Protein interactions for RNA: ENST00000582104.5

SNX11-210, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-210ENST00000582104 PCYOX1Q9UHG3 505 aa13.46□□□□□ -0.25
SNX11-210ENST00000582104 PCOLCE2Q9UKZ9 415 aa13.46□□□□□ -0.25
SNX11-210ENST00000582104 ATMQ13315 3056 aa13.46□□□□□ -0.25
SNX11-210ENST00000582104 USP9XQ93008 2570 aaPredicted RBP13.46□□□□□ -0.26
SNX11-210ENST00000582104 MGAQ8IWI9 3026 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 SGK1O00141 431 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 RNF103O00237 685 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 MUSKO15146 869 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 MATN3O15232 486 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 TTI1O43156 1089 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 RAD51CO43502 376 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 SMAD6O43541 496 aaKnown RBP13.45□□□□□ -0.26
SNX11-210ENST00000582104 JCHAINP01591 159 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 CHRM1P11229 460 aaPredicted RBP13.45□□□□□ -0.26
SNX11-210ENST00000582104 ETFBP38117 255 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 IFI35P80217 286 aaPredicted RBP13.45□□□□□ -0.26
SNX11-210ENST00000582104 MRPS21P82921 87 aaKnown RBP13.45□□□□□ -0.26
SNX11-210ENST00000582104 CFHR1Q03591 330 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 ZNF33AQ06730 810 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 CYTH1Q15438 398 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 TRIP13Q15645 432 aaPredicted RBP13.45□□□□□ -0.26
SNX11-210ENST00000582104 LRRC49Q8IUZ0 686 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 AHI1Q8N157 1196 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 PGBD5Q8N414 524 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 CNTD1Q8N815 330 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 ZNF557Q8N988 423 aaPredicted RBP13.45□□□□□ -0.26
SNX11-210ENST00000582104 TERB1Q8NA31 727 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 TXNDC5Q8NBS9 432 aaKnown RBP13.45□□□□□ -0.26
SNX11-210ENST00000582104 ATL2Q8NHH9 583 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 CCDC110Q8TBZ0 833 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 WFIKKN2Q8TEU8 576 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 RTP4Q96DX8 246 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 MYO19Q96H55 970 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 RPL10LQ96L21 214 aaKnown RBP13.45□□□□□ -0.26
SNX11-210ENST00000582104 MRGPRX3Q96LB0 322 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 CCDC114Q96M63 670 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 IL12RB2Q99665 862 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 TRIM51Q9BSJ1 452 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 BRD8Q9H0E9 1235 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 TOR4AQ9NXH8 423 aa13.45□□□□□ -0.26
SNX11-210ENST00000582104 DKK1O94907 266 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 KAT7O95251 611 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 KLF8O95600 359 aaPredicted RBP13.44□□□□□ -0.26
SNX11-210ENST00000582104 HLA-DQB2P05538 268 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 CCNB1P14635 433 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 CD68P34810 354 aaPredicted RBP13.44□□□□□ -0.26
SNX11-210ENST00000582104 EIF2DP41214 584 aaKnown RBP13.44□□□□□ -0.26
SNX11-210ENST00000582104 RGRP47804 291 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 IHHQ14623 411 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 PTPRNQ16849 979 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 EMC10Q5UCC4 262 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 PCSK4Q6UW60 755 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 JAMLQ86YT9 394 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 SLC41A1Q8IVJ1 513 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 ZNF567Q8N184 647 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 TAB3Q8N5C8 712 aaPredicted RBP13.44□□□□□ -0.26
SNX11-210ENST00000582104 TEX26Q8N6G2 289 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 IL17RCQ8NAC3 791 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 SLCO2A1Q92959 643 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 FATE1Q969F0 183 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 NSMCE3Q96MG7 304 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 FCRL3Q96P31 734 aaPredicted RBP13.44□□□□□ -0.26
SNX11-210ENST00000582104 LRRC1Q9BTT6 524 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 C2orf49Q9BVC5 232 aaPredicted RBP13.44□□□□□ -0.26
SNX11-210ENST00000582104 ZDHHC4Q9NPG8 344 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 ELOVL2Q9NXB9 296 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 UBA2Q9UBT2 640 aaPredicted RBP13.44□□□□□ -0.26
SNX11-210ENST00000582104 SLCO3A1Q9UIG8 710 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 HPCAL4Q9UM19 191 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 ERVW-1Q9UQF0 538 aa13.44□□□□□ -0.26
SNX11-210ENST00000582104 FCF1Q9Y324 198 aaKnown RBP13.44□□□□□ -0.26
SNX11-210ENST00000582104 A0A0A0MRY4 1105 aa13.43□□□□□ -0.26
SNX11-210ENST00000582104 TCRBV21S2A2A0A5A6 115 aa13.43□□□□□ -0.26
SNX11-210ENST00000582104 TTC24A2A3L6 582 aaPredicted RBP13.43□□□□□ -0.26
SNX11-210ENST00000582104 CFAP69A5D8W1 941 aa13.43□□□□□ -0.26
SNX11-210ENST00000582104 TBC1D3BA6NDS4 549 aa13.43□□□□□ -0.26
SNX11-210ENST00000582104 C5orf60A6NFR6 353 aa13.43□□□□□ -0.26
SNX11-210ENST00000582104 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.43□□□□□ -0.26
SNX11-210ENST00000582104 F5H423 210 aaPredicted RBP13.43□□□□□ -0.26
SNX11-210ENST00000582104 ZBTB24O43167 697 aaPredicted RBP13.43□□□□□ -0.26
SNX11-210ENST00000582104 ZNF821O75541 412 aaPredicted RBP13.43□□□□□ -0.26
SNX11-210ENST00000582104 TMCC1O94876 653 aa13.43□□□□□ -0.26
SNX11-210ENST00000582104 SLU7O95391 586 aaKnown RBP13.43□□□□□ -0.26
SNX11-210ENST00000582104 ECEL1O95672 775 aa13.43□□□□□ -0.26
SNX11-210ENST00000582104 IFNB1P01574 187 aa13.43□□□□□ -0.26
SNX11-210ENST00000582104 KRT14P02533 472 aa13.43□□□□□ -0.26
SNX11-210ENST00000582104 SRCP12931 536 aa13.43□□□□□ -0.26
SNX11-210ENST00000582104 POLR2EP19388 210 aaKnown RBP13.43□□□□□ -0.26
SNX11-210ENST00000582104 RPL22P35268 128 aaKnown RBP13.43□□□□□ -0.26
SNX11-210ENST00000582104 GRIA2P42262 883 aa13.43□□□□□ -0.26
SNX11-210ENST00000582104 VPS41P49754 854 aa13.43□□□□□ -0.26
SNX11-210ENST00000582104 SERPINH1P50454 418 aaKnown RBP13.43□□□□□ -0.26
SNX11-210ENST00000582104 ECT2LQ008S8 904 aa13.43□□□□□ -0.26
SNX11-210ENST00000582104 SLC7A5Q01650 507 aa13.43□□□□□ -0.26
SNX11-210ENST00000582104 DR1Q01658 176 aa13.43□□□□□ -0.26
SNX11-210ENST00000582104 LBRQ14739 615 aaKnown RBP13.43□□□□□ -0.26
SNX11-210ENST00000582104 TEX44Q53QW1 395 aa13.43□□□□□ -0.26
SNX11-210ENST00000582104 TMCO4Q5TGY1 634 aa13.43□□□□□ -0.26
SNX11-210ENST00000582104 TIGD7Q6NT04 549 aaPredicted RBP13.43□□□□□ -0.26
SNX11-210ENST00000582104 PGBD3Q8N328 593 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms