RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 PROSCO94903 275 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 TOP3BO95985 862 aaKnown RBP12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CSF2P04141 144 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 KRT7P08729 469 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 ALPPL2P10696 532 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CKMT2P17540 419 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 DGKAP23743 735 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 ARHGAP25P42331 645 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 PEX5P50542 639 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 PFN3P60673 137 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 BCL2L1Q07817 233 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 BNIP3Q12983 259 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 LBRQ14739 615 aaKnown RBP12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 SMAD1Q15797 465 aaKnown RBP12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 SMTNL2Q2TAL5 461 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 SARM1Q6SZW1 724 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 PARGQ86W56 976 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 TMPRSS12Q86WS5 348 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 VSIG1Q86XK7 387 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 SLC22A18ASQ8N1D0 253 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CACTIN-AS1Q8N1I8 211 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 EID2Q8N6I1 236 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 TSEN2Q8NCE0 465 aaKnown RBP12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 BTN2A2Q8WVV5 523 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 FATE1Q969F0 183 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CCDC42Q96M95 316 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 ZNF670Q9BS34 389 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 ANP32EQ9BTT0 268 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 DUSP23Q9BVJ7 150 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CALN1Q9BXU9 219 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 USP29Q9HBJ7 922 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 EVA1BQ9NVM1 165 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 NCKIPSDQ9NZQ3 722 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 KLK13Q9UKR3 277 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 INTUQ9ULD6 942 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 ARID1BQ8NFD5 2236 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 POM121BA6NF01 834 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 ZNF487B1APH4 448 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 H3BM21 787 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 MAFKO60675 156 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 MFAP3LO75121 409 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 PIAS2O75928 621 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 MTA2O94776 668 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 NME1P15531 152 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 SPINK2P20155 84 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 AMPD1P23109 780 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 CES1P23141 567 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 IL4RP24394 825 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 CLDN2P57739 230 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 KRT81Q14533 505 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 ZNF235Q14590 738 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 TCEAL1Q15170 157 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 PTAR1Q7Z6K3 402 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 RHOT2Q8IXI1 618 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 ATPAF2Q8N5M1 289 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 OR4C6Q8NH72 309 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 EXOC2Q96KP1 924 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 MYOCQ99972 504 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 FZD3Q9NPG1 666 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 KCTD5Q9NXV2 234 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 NLGN3Q9NZ94 848 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 AMACRQ9UHK6 382 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 CA5BQ9Y2D0 317 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 ATP8A1Q9Y2Q0 1164 aa12.7□□□□□ -0.38
CDK5RAP3-222ENST00000581708 C1QTNF9BB2RNN3 333 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 SCAMP1O15126 338 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 RAD51BO15315 384 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 INSIG1O15503 277 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 ZZEF1O43149 2961 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 BUB1BO60566 1050 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 MMP20O60882 483 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 RFPL3O75679 317 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 PIGNO95427 931 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 PEX11BO96011 259 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 C1QTNF9P0C862 333 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 TCF4P15884 667 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 ACP1P24666 158 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 MMP12P39900 470 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 SSR1P43307 286 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 ACADVLP49748 655 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 SCNN1BP51168 640 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 ARSEP51690 589 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 THOP1P52888 689 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 E2F1Q01094 437 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 SLC10A7Q0GE19 358 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 FZD2Q14332 565 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 PAFAH1B3Q15102 231 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 PROX2Q3B8N5 592 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 MARC1Q5VT66 337 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 TXNRD3NBQ6F5E7 133 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 TIGD7Q6NT04 549 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 CAMK1DQ8IU85 385 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 SDR16C5Q8N3Y7 309 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 SLC25A45Q8N413 288 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 PNPLA1Q8N8W4 532 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 FAM181AQ8N9Y4 354 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 KCTD6Q8NC69 237 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 ATL2Q8NHH9 583 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 BTBD6Q96KE9 485 aa12.69□□□□□ -0.38
CDK5RAP3-222ENST00000581708 NUDCD1Q96RS6 583 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms