RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 FRYQ5TBA9 3013 aa19.69■□□□□ 0.74
SREBF1-220ENST00000581707 COL5A1P20908 1838 aaPredicted RBP19.69■□□□□ 0.74
SREBF1-220ENST00000581707 SHROOM3Q8TF72 1996 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 TMEM110-MUSTN1A8MSY1 372 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 MUSKO15146 869 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 MAFKO60675 156 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 TM7SF2O76062 418 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 LDOC1O95751 146 aaPredicted RBP19.68■□□□□ 0.74
SREBF1-220ENST00000581707 KRT7P08729 469 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 MAN1A1P33908 653 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 RABIFP47224 123 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 SCNN1BP51168 640 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 TAS2R40P59535 323 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 BCL2L1Q07817 233 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 DPYSL3Q14195 570 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 ZNF235Q14590 738 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 MESDQ14696 234 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 TMEM52BQ4KMG9 183 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 SLC22A18ASQ8N1D0 253 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 ATPAF2Q8N5M1 289 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 CENPTQ96BT3 561 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 IFT43Q96FT9 208 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 WRAP53Q9BUR4 548 aaKnown RBP19.68■□□□□ 0.74
SREBF1-220ENST00000581707 C1QTNF7Q9BXJ2 289 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 PCDH12Q9NPG4 1184 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 MSRB2Q9Y3D2 182 aa19.68■□□□□ 0.74
SREBF1-220ENST00000581707 SDC3O75056 442 aa19.67■□□□□ 0.74
SREBF1-220ENST00000581707 DKK1O94907 266 aa19.67■□□□□ 0.74
SREBF1-220ENST00000581707 PEX11BO96011 259 aa19.67■□□□□ 0.74
SREBF1-220ENST00000581707 PDK2Q15119 407 aa19.67■□□□□ 0.74
SREBF1-220ENST00000581707 ERAP2Q6P179 960 aa19.67■□□□□ 0.74
SREBF1-220ENST00000581707 LRRC49Q8IUZ0 686 aa19.67■□□□□ 0.74
SREBF1-220ENST00000581707 MAP7D3Q8IWC1 876 aa19.67■□□□□ 0.74
SREBF1-220ENST00000581707 NSMCE1Q8WV22 266 aa19.67■□□□□ 0.74
SREBF1-220ENST00000581707 CNDP2Q96KP4 475 aaKnown RBP19.67■□□□□ 0.74
SREBF1-220ENST00000581707 GPR27Q9NS67 375 aa19.67■□□□□ 0.74
SREBF1-220ENST00000581707 LRRK1Q38SD2 2015 aa19.66■□□□□ 0.74
SREBF1-220ENST00000581707 FAM221BA6H8Z2 402 aa19.66■□□□□ 0.74
SREBF1-220ENST00000581707 ENC1O14682 589 aa19.66■□□□□ 0.74
SREBF1-220ENST00000581707 RIOK3O14730 519 aaKnown RBP19.66■□□□□ 0.74
SREBF1-220ENST00000581707 DGKAP23743 735 aa19.66■□□□□ 0.74
SREBF1-220ENST00000581707 HSPA9P38646 679 aaKnown RBP19.66■□□□□ 0.74
SREBF1-220ENST00000581707 AP1S1P61966 158 aa19.66■□□□□ 0.74
SREBF1-220ENST00000581707 CCDC157Q569K6 752 aa19.66■□□□□ 0.74
SREBF1-220ENST00000581707 ANKRD20A8PQ5CZ79 823 aa19.66■□□□□ 0.74
SREBF1-220ENST00000581707 ZFYVE27Q5T4F4 411 aa19.66■□□□□ 0.74
SREBF1-220ENST00000581707 ZSWIM9Q86XI8 627 aa19.66■□□□□ 0.74
SREBF1-220ENST00000581707 RHOT2Q8IXI1 618 aa19.66■□□□□ 0.74
SREBF1-220ENST00000581707 BBS5Q8N3I7 341 aa19.66■□□□□ 0.74
SREBF1-220ENST00000581707 PAF1Q8N7H5 531 aa19.66■□□□□ 0.74
SREBF1-220ENST00000581707 PCDH19Q8TAB3 1148 aa19.66■□□□□ 0.74
SREBF1-220ENST00000581707 ECHDC3Q96DC8 303 aa19.66■□□□□ 0.74
SREBF1-220ENST00000581707 ZNF670Q9BS34 389 aa19.66■□□□□ 0.74
SREBF1-220ENST00000581707 ATP8A1Q9Y2Q0 1164 aa19.66■□□□□ 0.74
SREBF1-220ENST00000581707 PTPRBP23467 1997 aa19.65■□□□□ 0.74
SREBF1-220ENST00000581707 SPTY2D1-AS1A0A0U1RR47 76 aa19.65■□□□□ 0.74
SREBF1-220ENST00000581707 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.65■□□□□ 0.74
SREBF1-220ENST00000581707 TTC24A2A3L6 582 aaPredicted RBP19.65■□□□□ 0.74
SREBF1-220ENST00000581707 MTA2O94776 668 aa19.65■□□□□ 0.74
SREBF1-220ENST00000581707 ARHGAP25P42331 645 aa19.65■□□□□ 0.74
SREBF1-220ENST00000581707 PFN3P60673 137 aa19.65■□□□□ 0.74
SREBF1-220ENST00000581707 POLR2LP62875 67 aaKnown RBP19.65■□□□□ 0.74
SREBF1-220ENST00000581707 FZD2Q14332 565 aa19.65■□□□□ 0.74
SREBF1-220ENST00000581707 PAFAH1B3Q15102 231 aaKnown RBP19.65■□□□□ 0.74
SREBF1-220ENST00000581707 ZNF542PQ5EBM4 170 aa19.65■□□□□ 0.74
SREBF1-220ENST00000581707 MARC1Q5VT66 337 aa19.65■□□□□ 0.74
SREBF1-220ENST00000581707 UNQ6494/PRO21346Q6UXR6 183 aa19.65■□□□□ 0.74
SREBF1-220ENST00000581707 SLC25A45Q8N413 288 aa19.65■□□□□ 0.74
SREBF1-220ENST00000581707 PGBD5Q8N414 524 aa19.65■□□□□ 0.74
SREBF1-220ENST00000581707 TC2NQ8N9U0 490 aa19.65■□□□□ 0.74
SREBF1-220ENST00000581707 NSMCE3Q96MG7 304 aa19.65■□□□□ 0.74
SREBF1-220ENST00000581707 DNAJC28Q9NX36 388 aa19.65■□□□□ 0.74
SREBF1-220ENST00000581707 INTUQ9ULD6 942 aa19.65■□□□□ 0.74
SREBF1-220ENST00000581707 COQ6Q9Y2Z9 468 aa19.65■□□□□ 0.74
SREBF1-220ENST00000581707 C1QTNF9BB2RNN3 333 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 TRAFD1O14545 582 aaPredicted RBP19.64■□□□□ 0.73
SREBF1-220ENST00000581707 MFSD11O43934 449 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 PIAS2O75928 621 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 PRKCGP05129 697 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 C1QTNF9P0C862 333 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 C6P13671 934 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 IGFALSP35858 605 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 MMP12P39900 470 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 LIG3P49916 1009 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 SEMG2Q02383 582 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 PDE1CQ14123 709 aaPredicted RBP19.64■□□□□ 0.73
SREBF1-220ENST00000581707 NCBP2-AS2Q69YL0 99 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 KDM7AQ6ZMT4 941 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 TP53I13Q8NBR0 393 aaPredicted RBP19.64■□□□□ 0.73
SREBF1-220ENST00000581707 RFFLQ8WZ73 363 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 GATA6Q92908 595 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 NUDCD1Q96RS6 583 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 MGME1Q9BQP7 344 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 TMEM121BQ9BXQ6 578 aaPredicted RBP19.64■□□□□ 0.73
SREBF1-220ENST00000581707 RBSNQ9H1K0 784 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 SCUBE2Q9NQ36 999 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 MBNL1Q9NR56 388 aaKnown RBP19.64■□□□□ 0.73
SREBF1-220ENST00000581707 UCKL1Q9NWZ5 548 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 IGF2RP11717 2491 aa19.64■□□□□ 0.73
SREBF1-220ENST00000581707 PROS1P07225 676 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms