RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 DNAJC7Q99615 494 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 SNRNP25Q9BV90 132 aaKnown RBP21.15■□□□□ 0.98
CCDC42-203ENST00000581598 DHX35Q9H5Z1 703 aaKnown RBP21.15■□□□□ 0.98
CCDC42-203ENST00000581598 EVA1BQ9NVM1 165 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 GPATCH2LQ9NWQ4 482 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 IPO11Q9UI26 975 aaKnown RBP21.15■□□□□ 0.98
CCDC42-203ENST00000581598 CLCA2Q9UQC9 943 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 SCINQ9Y6U3 715 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 LRRK1Q38SD2 2015 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 ARHGAP42A6NI28 874 aa21.14■□□□□ 0.97
CCDC42-203ENST00000581598 GOLGA6L6A8MZA4 724 aa21.14■□□□□ 0.97
CCDC42-203ENST00000581598 K7ESM1 405 aa21.14■□□□□ 0.97
CCDC42-203ENST00000581598 DDX3XO00571 662 aaKnown RBP eCLIP21.14■□□□□ 0.97
CCDC42-203ENST00000581598 INSIG1O15503 277 aa21.14■□□□□ 0.97
CCDC42-203ENST00000581598 MYBL1P10243 752 aa21.14■□□□□ 0.97
CCDC42-203ENST00000581598 HNRNPH3P31942 346 aaKnown RBP21.14■□□□□ 0.97
CCDC42-203ENST00000581598 IGFALSP35858 605 aa21.14■□□□□ 0.97
CCDC42-203ENST00000581598 HCAR3P49019 387 aa21.14■□□□□ 0.97
CCDC42-203ENST00000581598 DUSP3P51452 185 aaPredicted RBP21.14■□□□□ 0.97
CCDC42-203ENST00000581598 KLHL30Q0D2K2 578 aa21.14■□□□□ 0.97
CCDC42-203ENST00000581598 ELP6Q0PNE2 266 aa21.14■□□□□ 0.97
CCDC42-203ENST00000581598 PTK2BQ14289 1009 aa21.14■□□□□ 0.97
CCDC42-203ENST00000581598 CA9Q16790 459 aa21.14■□□□□ 0.97
CCDC42-203ENST00000581598 ZNF542PQ5EBM4 170 aa21.14■□□□□ 0.97
CCDC42-203ENST00000581598 TPRG1LQ5T0D9 272 aa21.14■□□□□ 0.97
CCDC42-203ENST00000581598 CYP4V2Q6ZWL3 525 aaPredicted RBP21.14■□□□□ 0.97
CCDC42-203ENST00000581598 BTN2A2Q8WVV5 523 aa21.14■□□□□ 0.97
CCDC42-203ENST00000581598 SYN2Q92777 582 aaPredicted RBP21.14■□□□□ 0.97
CCDC42-203ENST00000581598 TRIM11Q96F44 468 aa21.14■□□□□ 0.97
CCDC42-203ENST00000581598 APOLD1Q96LR9 279 aa21.14■□□□□ 0.97
CCDC42-203ENST00000581598 ZNF641Q96N77 438 aaPredicted RBP21.14■□□□□ 0.97
CCDC42-203ENST00000581598 PEBP4Q96S96 227 aa21.14■□□□□ 0.97
CCDC42-203ENST00000581598 SLC39A8Q9C0K1 460 aa21.14■□□□□ 0.97
CCDC42-203ENST00000581598 CNOT8Q9UFF9 292 aaKnown RBP21.14■□□□□ 0.97
CCDC42-203ENST00000581598 LY6G6EA0A0G2JKS1 128 aa21.13■□□□□ 0.97
CCDC42-203ENST00000581598 J3KR12 359 aa21.13■□□□□ 0.97
CCDC42-203ENST00000581598 TPP1O14773 563 aa21.13■□□□□ 0.97
CCDC42-203ENST00000581598 MIPP30301 263 aa21.13■□□□□ 0.97
CCDC42-203ENST00000581598 EIF2B5Q13144 721 aaKnown RBP21.13■□□□□ 0.97
CCDC42-203ENST00000581598 ACAP1Q15027 740 aa21.13■□□□□ 0.97
CCDC42-203ENST00000581598 ZCCHC8Q6NZY4 707 aaKnown RBP21.13■□□□□ 0.97
CCDC42-203ENST00000581598 RFX8Q6ZV50 586 aa21.13■□□□□ 0.97
CCDC42-203ENST00000581598 TP53I13Q8NBR0 393 aaPredicted RBP21.13■□□□□ 0.97
CCDC42-203ENST00000581598 NETO2Q8NC67 525 aa21.13■□□□□ 0.97
CCDC42-203ENST00000581598 TUBGCP5Q96RT8 1024 aa21.13■□□□□ 0.97
CCDC42-203ENST00000581598 KCTD15Q96SI1 283 aaPredicted RBP21.13■□□□□ 0.97
CCDC42-203ENST00000581598 ISCUQ9H1K1 167 aa21.13■□□□□ 0.97
CCDC42-203ENST00000581598 SUV39H2Q9H5I1 410 aa21.13■□□□□ 0.97
CCDC42-203ENST00000581598 CAAP1Q9H8G2 361 aa21.13■□□□□ 0.97
CCDC42-203ENST00000581598 MRPL47Q9HD33 250 aaKnown RBP21.13■□□□□ 0.97
CCDC42-203ENST00000581598 NCKIPSDQ9NZQ3 722 aa21.13■□□□□ 0.97
CCDC42-203ENST00000581598 PCSK1NQ9UHG2 260 aa21.13■□□□□ 0.97
CCDC42-203ENST00000581598 KLF15Q9UIH9 416 aa21.13■□□□□ 0.97
CCDC42-203ENST00000581598 U3KQA8 63 aa21.13■□□□□ 0.97
CCDC42-203ENST00000581598 ANKRD36A6QL64 1941 aa21.13■□□□□ 0.97
CCDC42-203ENST00000581598 AQP9O43315 295 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 PRPSAP2O60256 369 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 MMP20O60882 483 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 LRCH4O75427 683 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 PIGNO95427 931 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 MT-CO3P00414 261 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 JUNDP17535 347 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 ERCC2P18074 760 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 PAPOLAP51003 745 aaKnown RBP21.12■□□□□ 0.97
CCDC42-203ENST00000581598 ADKP55263 362 aaKnown RBP21.12■□□□□ 0.97
CCDC42-203ENST00000581598 RFTN1Q14699 578 aaPredicted RBP21.12■□□□□ 0.97
CCDC42-203ENST00000581598 AGERQ15109 404 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 UGP2Q16851 508 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 COL28A1Q2UY09 1125 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 CDCP2Q5VXM1 449 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 BRAT1Q6PJG6 821 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 C19orf48Q6RUI8 117 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 ARHGAP12Q8IWW6 846 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 OR8K1Q8NGG5 319 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 ZNF653Q96CK0 615 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 CELF6Q96J87 481 aaKnown RBP21.12■□□□□ 0.97
CCDC42-203ENST00000581598 EXOC2Q96KP1 924 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 PANX2Q96RD6 677 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 TRIM7Q9C029 511 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 ABHD10Q9NUJ1 306 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 SALL4Q9UJQ4 1053 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 CELSR3Q9NYQ7 3312 aa21.12■□□□□ 0.97
CCDC42-203ENST00000581598 LZTS3O60299 673 aaPredicted RBP21.11■□□□□ 0.97
CCDC42-203ENST00000581598 ITIH2P19823 946 aa21.11■□□□□ 0.97
CCDC42-203ENST00000581598 FECHP22830 423 aa21.11■□□□□ 0.97
CCDC42-203ENST00000581598 XPAP23025 273 aaPredicted RBP21.11■□□□□ 0.97
CCDC42-203ENST00000581598 PCK1P35558 622 aa21.11■□□□□ 0.97
CCDC42-203ENST00000581598 THOP1P52888 689 aa21.11■□□□□ 0.97
CCDC42-203ENST00000581598 LRRC73Q5JTD7 316 aa21.11■□□□□ 0.97
CCDC42-203ENST00000581598 MACC1Q6ZN28 852 aa21.11■□□□□ 0.97
CCDC42-203ENST00000581598 VPS36Q86VN1 386 aa21.11■□□□□ 0.97
CCDC42-203ENST00000581598 SPASTQ9UBP0 616 aa21.11■□□□□ 0.97
CCDC42-203ENST00000581598 ITPR1Q14643 2758 aa21.1■□□□□ 0.97
CCDC42-203ENST00000581598 CFAP69A5D8W1 941 aa21.1■□□□□ 0.97
CCDC42-203ENST00000581598 DAPK3O43293 454 aa21.1■□□□□ 0.97
CCDC42-203ENST00000581598 OPA1O60313 960 aa21.1■□□□□ 0.97
CCDC42-203ENST00000581598 BUB1BO60566 1050 aaPredicted RBP21.1■□□□□ 0.97
CCDC42-203ENST00000581598 NEBLO76041 1014 aa21.1■□□□□ 0.97
CCDC42-203ENST00000581598 PEX5P50542 639 aa21.1■□□□□ 0.97
CCDC42-203ENST00000581598 IL10RBQ08334 325 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms