RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 DKK3Q9UBP4 350 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 TRHDEQ9UKU6 1024 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 EML5Q05BV3 1969 aa15.67■□□□□ 0.1
SS18-216ENST00000580751 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.66■□□□□ 0.1
SS18-216ENST00000580751 A0A1W2PQ67 120 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 KCNN4O15554 427 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 MAP3K13O43283 966 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 SOCS5O75159 536 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 PIGNO95427 931 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 RHOXF2BP0C7M4 288 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 ITIH2P19823 946 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 CA4P22748 312 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 NEK3P51956 506 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 METAP1P53582 386 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 CAV1Q03135 178 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 CNTN1Q12860 1018 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 BRAT1Q6PJG6 821 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 CEP68Q76N32 757 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 PCGF5Q86SE9 256 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 FAM124AQ86V42 546 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 PAF1Q8N7H5 531 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 CNTD1Q8N815 330 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 VOPP1Q96AW1 172 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 ARRDC3Q96B67 414 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 LRRC45Q96CN5 670 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 TOE1Q96GM8 510 aaKnown RBP15.66■□□□□ 0.1
SS18-216ENST00000580751 TEKT5Q96M29 485 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 KLHL32Q96NJ5 620 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 AGAP3Q96P47 875 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 PPP1R2P1Q96PQ5 205 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 RHOXF2Q9BQY4 288 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 TMEM121Q9BTD3 319 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 CEP41Q9BYV8 373 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 SUV39H2Q9H5I1 410 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 NOD2Q9HC29 1040 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 WSB2Q9NYS7 404 aaPredicted RBP15.66■□□□□ 0.1
SS18-216ENST00000580751 WHRNQ9P202 907 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 PAK5Q9P286 719 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 SERGEFQ9UGK8 458 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 R4GN57 208 aa15.66■□□□□ 0.1
SS18-216ENST00000580751 TSPAN11A1L157 253 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 C16orf96A6NNT2 1141 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 HRO43593 1189 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 OPHN1O60890 802 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 NDUFS2O75306 463 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 GJB3O75712 270 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 KRT14P02533 472 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 SERPINF2P08697 491 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 DSC2Q02487 901 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 SRSF5Q13243 272 aaKnown RBP15.65■□□□□ 0.1
SS18-216ENST00000580751 SIM2Q14190 667 aaPredicted RBP15.65■□□□□ 0.1
SS18-216ENST00000580751 ELF2Q15723 593 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 PIP5KL1Q5T9C9 394 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 AGBL4Q5VU57 503 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 ITPRIPL1Q6GPH6 555 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 FBXL19Q6PCT2 694 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.65■□□□□ 0.1
SS18-216ENST00000580751 PARS2Q7L3T8 475 aaKnown RBP15.65■□□□□ 0.1
SS18-216ENST00000580751 CAMK1DQ8IU85 385 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 FAM160A2Q8N612 972 aaPredicted RBP15.65■□□□□ 0.1
SS18-216ENST00000580751 ARRDC2Q8TBH0 407 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 SPOCK2Q92563 424 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 RAB7BQ96AH8 199 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 TSPYL1Q9H0U9 437 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 PCED1AQ9H1Q7 454 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 SLC25A51Q9H1U9 297 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 NEUROG2Q9H2A3 272 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 DMGDHQ9UI17 866 aaKnown RBP15.65■□□□□ 0.1
SS18-216ENST00000580751 INVSQ9Y283 1065 aa15.65■□□□□ 0.1
SS18-216ENST00000580751 ARIH1Q9Y4X5 557 aaPredicted RBP15.65■□□□□ 0.1
SS18-216ENST00000580751 SPAG17Q6Q759 2223 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 UQCRHLA0A096LP55 91 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 TTC24A2A3L6 582 aaPredicted RBP15.64■□□□□ 0.09
SS18-216ENST00000580751 LRRC72A6NJI9 287 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 PLRG1O43660 514 aaKnown RBP15.64■□□□□ 0.09
SS18-216ENST00000580751 SEMA4FO95754 770 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 UQCRHP07919 91 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 ADRB3P13945 408 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 BCKDHBP21953 392 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 XPAP23025 273 aaPredicted RBP15.64■□□□□ 0.09
SS18-216ENST00000580751 SUOXP51687 545 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 ADPRHP54922 357 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 POLR2LP62875 67 aaKnown RBP15.64■□□□□ 0.09
SS18-216ENST00000580751 GUCY2DQ02846 1103 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 RPL6Q02878 288 aaKnown RBP15.64■□□□□ 0.09
SS18-216ENST00000580751 BRD3Q15059 726 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 SLC14A2Q15849 920 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 SPDYCQ5MJ68 293 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 LPCAT2Q7L5N7 544 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 PID1Q7Z2X4 250 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 ZNF567Q8N184 647 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 FRMD1Q8N878 549 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 FAM71DQ8N9W8 422 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 OR14C36Q8NHC7 312 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 ECHDC3Q96DC8 303 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 IMP4Q96G21 291 aaKnown RBP15.64■□□□□ 0.09
SS18-216ENST00000580751 SPATA13Q96N96 652 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 FOXP3Q9BZS1 431 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 EPC1Q9H2F5 836 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 KDM4CQ9H3R0 1056 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms