RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 FARP1Q9Y4F1 1045 aaPredicted RBP11.31□□□□□ -0.6
SUPT4H1-203ENST00000579289 PCDHB11Q9Y5F2 797 aa11.31□□□□□ -0.6
SUPT4H1-203ENST00000579289 C2CD3Q4AC94 2353 aa11.31□□□□□ -0.6
SUPT4H1-203ENST00000579289 HIVEP3Q5T1R4 2406 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 IGHV5-10-1A0A0J9YXX1 117 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 LOC101059948A0A1B0GTJ6 334 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 PRR19A6NJB7 356 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 MMP20O60882 483 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 CLDN1O95832 211 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 PDGFAP04085 211 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 TBXAS1P24557 533 aaPredicted RBP11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 CD1CP29017 333 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 ACADSBP45954 432 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 PEX5P50542 639 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 IRF4Q15306 451 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 MEA1Q16626 185 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 CCDC40Q4G0X9 1142 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 LRRC73Q5JTD7 316 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 TIPARPQ7Z3E1 657 aaKnown RBP11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 BNIPLQ7Z465 357 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 VPS36Q86VN1 386 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 PCDH20Q8N6Y1 951 aaKnown RBP11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 RCBTB1Q8NDN9 531 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 GPBAR1Q8TDU6 330 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 NT5C3BQ969T7 300 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 PDXPQ96GD0 296 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 CCDC114Q96M63 670 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 CATSPER2Q96P56 530 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 TAAR9Q96RI9 348 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 NUDT22Q9BRQ3 303 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 METTL14Q9HCE5 456 aaKnown RBP11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 PIGVQ9NUD9 493 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 DDIT4Q9NX09 232 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 MPP6Q9NZW5 540 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 SRPK3Q9UPE1 567 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 TP53TG5Q9Y2B4 290 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 FCF1Q9Y324 198 aaKnown RBP11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 PCDHB4Q9Y5E5 795 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 ST14Q9Y5Y6 855 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 DGKBQ9Y6T7 804 aa11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 ARHGEF17Q96PE2 2063 aaPredicted RBP11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 PRRC2CQ9Y520 2896 aaKnown RBP11.3□□□□□ -0.6
SUPT4H1-203ENST00000579289 POLQO75417 2590 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 BICDL2A1A5D9 508 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 NUDT21O43809 227 aaKnown RBP11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 RHOCP08134 193 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 ALPIP09923 528 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 SLC2A3P11169 496 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 GNLYP22749 145 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 DCTP40126 519 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 CXCR3P49682 368 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 THOP1P52888 689 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 SRP54P61011 504 aaKnown RBP11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 YWHAEP62258 255 aaKnown RBP11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 KLRB1Q12918 225 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 PAK1Q13153 545 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 SQSTM1Q13501 440 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 AGERQ15109 404 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 KLHL40Q2TBA0 621 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 ZNF805Q5CZA5 627 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 ATP1A1-AS1Q5TC04 95 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 NRROSQ86YC3 692 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 HID1Q8IV36 788 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 OR6K2Q8NGY2 324 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 CCL4L1Q8NHW4 92 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 SSC4DQ8WTU2 575 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 OR1E3Q8WZA6 343 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 ISG20Q96AZ6 181 aaKnown RBP11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 ST7Q9NRC1 585 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 NDFIP2Q9NV92 336 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 ASNSD1Q9NWL6 643 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 LRIT1Q9P2V4 623 aa11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 HECAQ9UBI9 543 aaPredicted RBP11.29□□□□□ -0.6
SUPT4H1-203ENST00000579289 CXorf51AA0A1B0GTR3 108 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 ILVBLA1L0T0 632 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 TMEM202A6NGA9 273 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 ZNF891A8MT65 544 aaPredicted RBP11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 HGSO14964 777 aaPredicted RBP11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 RAD1O60671 282 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 RASGRP1O95267 797 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 FUCA1P04066 466 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 GLI1P08151 1106 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 TIMP2P16035 220 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 GM2AP17900 193 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 F8A1P23610 371 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 FMO5P49326 533 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 OR1D5P58170 312 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 CDK17Q00537 523 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 SLC20A2Q08357 652 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 CDC20Q12834 499 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 PDCLQ13371 301 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 NFATC4Q14934 902 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 TMEM52BQ4KMG9 183 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 C14orf28Q4W4Y0 310 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 CRTC2Q53ET0 693 aaPredicted RBP11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 OLFML1Q6UWY5 402 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 GKN2Q86XP6 184 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 ZNF606Q8WXB4 792 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 RNF34Q969K3 372 aa11.28□□□□□ -0.6
SUPT4H1-203ENST00000579289 C1orf74Q96LT6 269 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms