RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 HID1Q8IV36 788 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 SLC35F3Q8IY50 421 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 TP53I13Q8NBR0 393 aaPredicted RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 PLA2G15Q8NCC3 412 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 OR2AP1Q8NGE2 309 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 CXorf40AQ8TE69 158 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 BTN2A2Q8WVV5 523 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 TTC9Q92623 222 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 IFT43Q96FT9 208 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 PPP1R16AQ96I34 528 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 EXOC2Q96KP1 924 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 NSMCE3Q96MG7 304 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 LENG8Q96PV6 779 aaPredicted RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 PCDHB18PQ96TA0 734 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 CCDC3Q9BQI4 270 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 C11orf70Q9BRQ4 267 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 APOOQ9BUR5 198 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 DUSP23Q9BVJ7 150 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 NAA15Q9BXJ9 866 aaKnown RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 FOXP3Q9BZS1 431 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 CEP44Q9C0F1 390 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 TTYH3Q9C0H2 523 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 NOL6Q9H6R4 1146 aaKnown RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 SUDS3Q9H7L9 328 aaPredicted RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 EPB41L5Q9HCM4 733 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 MRPL40Q9NQ50 206 aaKnown RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 GPR27Q9NS67 375 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 ANO10Q9NW15 660 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 TMEM248Q9NWD8 314 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 GPATCH2LQ9NWQ4 482 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 TAB2Q9NYJ8 693 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 PPARGC1AQ9UBK2 798 aaKnown RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 SPASTQ9UBP0 616 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 APOBEC3BQ9UH17 382 aaKnown RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 MOSPD1Q9UJG1 213 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 SALL4Q9UJQ4 1053 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 ATXN7L1Q9ULK2 861 aaPredicted RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 HPCAL4Q9UM19 191 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 DOLKQ9UPQ8 538 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 OR1A2Q9Y585 309 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 ZNF106Q9H2Y7 1883 aaKnown RBP3.88□□□□□ -1.79
NUP85-209ENST00000578987 MGAQ8IWI9 3026 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 TRBV23OR9-2A0A075B6M9 112 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 A0A0U1RQS6 177 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 TMEM202A6NGA9 273 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 LRRC10BA6NIK2 292 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 C2CD4BA6NLJ0 364 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 CDRT15L2A8MXV6 281 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 B8ZZF3 427 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 LMO7DNF2Z398 122 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 J3KR12 359 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 J3QKU1 62 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 K7ENP7 123 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 ERVH48-1M5A8F1 160 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 TPP1O14773 563 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 RAMP2O60895 175 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 DXOO77932 396 aaKnown RBP3.88□□□□□ -1.79
NUP85-209ENST00000578987 TMCC1O94876 653 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 CYP1A1P04798 512 aaPredicted RBP3.88□□□□□ -1.79
NUP85-209ENST00000578987 PCCBP05166 539 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 GP1BAP07359 652 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 KRT3P12035 628 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 RHOQP17081 205 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 ITIH1P19827 911 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 XPAP23025 273 aaPredicted RBP3.88□□□□□ -1.79
NUP85-209ENST00000578987 EPHB2P29323 1055 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 SDC4P31431 198 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 SLC5A2P31639 672 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 SCNN1AP37088 669 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 ETV5P41161 510 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 RGRP47804 291 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 CLCN6P51797 869 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 HK3P52790 923 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 HDAC4P56524 1084 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 ERVPABLB-1P60509 514 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 RHOAP61586 193 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 RPL7AP62424 266 aaKnown RBP3.88□□□□□ -1.79
NUP85-209ENST00000578987 CYP4F2P78329 520 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 TAGLNQ01995 201 aaKnown RBP3.88□□□□□ -1.79
NUP85-209ENST00000578987 NFATC3Q12968 1075 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 PTP4A2Q12974 167 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 CLN3Q13286 438 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 MTA1Q13330 715 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 SPIDRQ14159 915 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 PTK2BQ14289 1009 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 LRRC14Q15048 493 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 PTPRRQ15256 657 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 IRF4Q15306 451 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 ALG11Q2TAA5 492 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 TSNAXIP1Q2TAA8 658 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 ARL13BQ3SXY8 428 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 LINC00303Q3SY05 128 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 TCP11X2Q5H9J9 407 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 C6orf132Q5T0Z8 1188 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 MANEALQ5VSG8 457 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 ESRP1Q6NXG1 681 aaKnown RBP3.88□□□□□ -1.79
NUP85-209ENST00000578987 INO80CQ6PI98 192 aaPredicted RBP3.88□□□□□ -1.79
NUP85-209ENST00000578987 ZNF783Q6ZMS7 281 aa3.88□□□□□ -1.79
NUP85-209ENST00000578987 RBM44Q6ZP01 1051 aaKnown RBP3.88□□□□□ -1.79
NUP85-209ENST00000578987 USP53Q70EK8 1073 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms