RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 SPANXN3Q5MJ09 141 aa20.44■□□□□ 0.86
SMG8-203ENST00000578922 COL13A1Q5TAT6 717 aaPredicted RBP20.44■□□□□ 0.86
SMG8-203ENST00000578922 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.44■□□□□ 0.86
SMG8-203ENST00000578922 MIEF2Q96C03 454 aa20.44■□□□□ 0.86
SMG8-203ENST00000578922 NPHS2Q9NP85 383 aa20.44■□□□□ 0.86
SMG8-203ENST00000578922 ZDHHC7Q9NXF8 308 aa20.44■□□□□ 0.86
SMG8-203ENST00000578922 SEPT3Q9UH03 358 aa20.44■□□□□ 0.86
SMG8-203ENST00000578922 GOLGA8TH3BQL2 631 aa20.44■□□□□ 0.86
SMG8-203ENST00000578922 CALB2P22676 271 aa20.44■□□□□ 0.86
SMG8-203ENST00000578922 SLC18A2Q05940 514 aa20.44■□□□□ 0.86
SMG8-203ENST00000578922 TNK2Q07912 1038 aa20.44■□□□□ 0.86
SMG8-203ENST00000578922 TAF1BQ53T94 588 aaPredicted RBP20.44■□□□□ 0.86
SMG8-203ENST00000578922 CLNKQ7Z7G1 428 aa20.44■□□□□ 0.86
SMG8-203ENST00000578922 TMEM135Q86UB9 458 aa20.44■□□□□ 0.86
SMG8-203ENST00000578922 BBS5Q8N3I7 341 aa20.44■□□□□ 0.86
SMG8-203ENST00000578922 ITFG1Q8TB96 612 aa20.44■□□□□ 0.86
SMG8-203ENST00000578922 SMG7Q92540 1137 aaKnown RBP20.44■□□□□ 0.86
SMG8-203ENST00000578922 TTC17Q96AE7 1141 aa20.44■□□□□ 0.86
SMG8-203ENST00000578922 CERS2Q96G23 380 aa20.44■□□□□ 0.86
SMG8-203ENST00000578922 APOL5Q9BWW9 433 aa20.44■□□□□ 0.86
SMG8-203ENST00000578922 IGFLR1Q9H665 355 aa20.44■□□□□ 0.86
SMG8-203ENST00000578922 SOX13Q9UN79 622 aa20.44■□□□□ 0.86
SMG8-203ENST00000578922 MRPS23Q9Y3D9 190 aaKnown RBP20.44■□□□□ 0.86
SMG8-203ENST00000578922 ZCWPW2A0A1B0GU75 182 aa20.43■□□□□ 0.86
SMG8-203ENST00000578922 AP3B1O00203 1094 aa20.43■□□□□ 0.86
SMG8-203ENST00000578922 SCNN1BP51168 640 aa20.43■□□□□ 0.86
SMG8-203ENST00000578922 CYTH1Q15438 398 aa20.43■□□□□ 0.86
SMG8-203ENST00000578922 MPPE1Q53F39 396 aa20.43■□□□□ 0.86
SMG8-203ENST00000578922 APCDD1Q8J025 514 aa20.43■□□□□ 0.86
SMG8-203ENST00000578922 CPXM2Q8N436 756 aa20.43■□□□□ 0.86
SMG8-203ENST00000578922 FAM13CQ8NE31 585 aa20.43■□□□□ 0.86
SMG8-203ENST00000578922 APOPT1Q96IL0 206 aa20.43■□□□□ 0.86
SMG8-203ENST00000578922 VPS45Q9NRW7 570 aa20.43■□□□□ 0.86
SMG8-203ENST00000578922 MSRAQ9UJ68 235 aa20.43■□□□□ 0.86
SMG8-203ENST00000578922 PSAT1Q9Y617 370 aa20.43■□□□□ 0.86
SMG8-203ENST00000578922 REV3LO60673 3130 aa20.43■□□□□ 0.86
SMG8-203ENST00000578922 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.42■□□□□ 0.86
SMG8-203ENST00000578922 FAM237BA0A1B0GVD1 139 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.42■□□□□ 0.86
SMG8-203ENST00000578922 TRIM49D1C9J1S8 452 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 USP1O94782 785 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 PFKLP17858 780 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 DDX6P26196 483 aaKnown RBP eCLIP20.42■□□□□ 0.86
SMG8-203ENST00000578922 NEK3P51956 506 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 LONP2Q86WA8 852 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 VN1R2Q8NFZ6 395 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 ATP2A3Q93084 1043 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 SERAC1Q96JX3 654 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 PSKH2Q96QS6 385 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 SLC28A3Q9HAS3 691 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 ZFATQ9P243 1243 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 DPP7Q9UHL4 492 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 VPS51Q9UID3 782 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 MTO1Q9Y2Z2 717 aaKnown RBP20.42■□□□□ 0.86
SMG8-203ENST00000578922 MIA3Q5JRA6 1907 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 E2F8A0AVK6 867 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 CD160O95971 181 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 LMNAP02545 664 aaKnown RBP20.42■□□□□ 0.86
SMG8-203ENST00000578922 PCID2Q5JVF3 399 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 MROH9Q5TGP6 573 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 TMEM25Q86YD3 366 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 ENDOVQ8N8Q3 282 aaKnown RBP20.42■□□□□ 0.86
SMG8-203ENST00000578922 CDKL2Q92772 493 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 NSMCE3Q96MG7 304 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 MGME1Q9BQP7 344 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 TSSK1BQ9BXA7 367 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 LINC00597Q9H2U6 94 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 C20orf96Q9NUD7 363 aaPredicted RBP20.42■□□□□ 0.86
SMG8-203ENST00000578922 OR51B4Q9Y5P0 310 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 PRRC2BQ5JSZ5 2229 aaKnown RBP20.42■□□□□ 0.86
SMG8-203ENST00000578922 MYOFQ9NZM1 2061 aa20.42■□□□□ 0.86
SMG8-203ENST00000578922 MAGEB16A2A368 324 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 DNAJC6O75061 913 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 TMCC1O94876 653 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 MT-CO1P00395 513 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 ETV4P43268 484 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 CTC1Q2NKJ3 1217 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 HSP90AA5PQ58FG0 334 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 MTDHQ86UE4 582 aaKnown RBP20.41■□□□□ 0.86
SMG8-203ENST00000578922 ARID3BQ8IVW6 561 aaPredicted RBP20.41■□□□□ 0.86
SMG8-203ENST00000578922 LEMD2Q8NC56 503 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 PPHLN1Q8NEY8 458 aaKnown RBP20.41■□□□□ 0.86
SMG8-203ENST00000578922 IFT43Q96FT9 208 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 AGAP2Q99490 1192 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 KIFC1Q9BW19 673 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 SLC17A7Q9P2U7 560 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 SLC2A6Q9UGQ3 507 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 FCF1Q9Y324 198 aaKnown RBP20.41■□□□□ 0.86
SMG8-203ENST00000578922 MYLKQ15746 1914 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 HELZP42694 1942 aaKnown RBP20.41■□□□□ 0.86
SMG8-203ENST00000578922 ATG2AQ2TAZ0 1938 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 KLF11O14901 512 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 ZMPSTE24O75844 475 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 GNAZP19086 355 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 CD70P32970 193 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 LMAN2Q12907 356 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 GALNT3Q14435 633 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 NAA25Q14CX7 972 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 SIRPB2Q5JXA9 342 aa20.41■□□□□ 0.86
SMG8-203ENST00000578922 PKN3Q6P5Z2 889 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms