RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 BPIFA3Q9BQP9 254 aa15.09■□□□□ 0.01
RN7SL560P-201ENST00000577943 SNRNP25Q9BV90 132 aaKnown RBP15.09■□□□□ 0.01
RN7SL560P-201ENST00000577943 SLC39A8Q9C0K1 460 aa15.09■□□□□ 0.01
RN7SL560P-201ENST00000577943 TCEAL2Q9H3H9 227 aaPredicted RBP15.09■□□□□ 0.01
RN7SL560P-201ENST00000577943 SUV39H2Q9H5I1 410 aa15.09■□□□□ 0.01
RN7SL560P-201ENST00000577943 HAUS4Q9H6D7 363 aa15.09■□□□□ 0.01
RN7SL560P-201ENST00000577943 MBNL1Q9NR56 388 aaKnown RBP15.09■□□□□ 0.01
RN7SL560P-201ENST00000577943 NCKIPSDQ9NZQ3 722 aa15.09■□□□□ 0.01
RN7SL560P-201ENST00000577943 COQ6Q9Y2Z9 468 aa15.09■□□□□ 0.01
RN7SL560P-201ENST00000577943 PCDHB1Q9Y5F3 818 aa15.09■□□□□ 0.01
RN7SL560P-201ENST00000577943 CPED1A4D0V7 1026 aa15.08■□□□□ 0
RN7SL560P-201ENST00000577943 TOR1BO14657 336 aa15.08■□□□□ 0
RN7SL560P-201ENST00000577943 TPP1O14773 563 aa15.08■□□□□ 0
RN7SL560P-201ENST00000577943 PRPSAP2O60256 369 aa15.08■□□□□ 0
RN7SL560P-201ENST00000577943 PALMO75781 387 aa15.08■□□□□ 0
RN7SL560P-201ENST00000577943 FTLP02792 175 aaPredicted RBP15.08■□□□□ 0
RN7SL560P-201ENST00000577943 ACTN2P35609 894 aa15.08■□□□□ 0
RN7SL560P-201ENST00000577943 EIF4A3P38919 411 aaKnown RBP15.08■□□□□ 0
RN7SL560P-201ENST00000577943 PAPOLAP51003 745 aaKnown RBP15.08■□□□□ 0
RN7SL560P-201ENST00000577943 PPARDQ03181 441 aa15.08■□□□□ 0
RN7SL560P-201ENST00000577943 C1orf61Q13536 156 aa15.08■□□□□ 0
RN7SL560P-201ENST00000577943 IRF4Q15306 451 aa15.08■□□□□ 0
RN7SL560P-201ENST00000577943 UGP2Q16851 508 aa15.08■□□□□ 0
RN7SL560P-201ENST00000577943 CDCP2Q5VXM1 449 aa15.08■□□□□ 0
RN7SL560P-201ENST00000577943 ERAP2Q6P179 960 aa15.08■□□□□ 0
RN7SL560P-201ENST00000577943 MACC1Q6ZN28 852 aa15.08■□□□□ 0
RN7SL560P-201ENST00000577943 ZNF571Q7Z3V5 609 aaPredicted RBP15.08■□□□□ 0
RN7SL560P-201ENST00000577943 TP53I13Q8NBR0 393 aaPredicted RBP15.08■□□□□ 0
RN7SL560P-201ENST00000577943 SNIP1Q8TAD8 396 aaKnown RBP15.08■□□□□ 0
RN7SL560P-201ENST00000577943 HCAR2Q8TDS4 363 aa15.08■□□□□ 0
RN7SL560P-201ENST00000577943 GLMNQ92990 594 aa15.08■□□□□ 0
RN7SL560P-201ENST00000577943 SLC13A1Q9BZW2 595 aa15.08■□□□□ 0
RN7SL560P-201ENST00000577943 PDFQ9HBH1 243 aa15.08■□□□□ 0
RN7SL560P-201ENST00000577943 CNOT8Q9UFF9 292 aaKnown RBP15.08■□□□□ 0
RN7SL560P-201ENST00000577943 SALL4Q9UJQ4 1053 aa15.08■□□□□ 0
RN7SL560P-201ENST00000577943 COL27A1Q8IZC6 1860 aaPredicted RBP15.08■□□□□ 0
RN7SL560P-201ENST00000577943 BPTFQ12830 3046 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 ITPR1Q14643 2758 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 TMEM191CA6NGB0 347 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 RIOK3O14730 519 aaKnown RBP15.07■□□□□ 0
RN7SL560P-201ENST00000577943 CSO75390 466 aaKnown RBP15.07■□□□□ 0
RN7SL560P-201ENST00000577943 GCATO75600 419 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 ANXA6P08133 673 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 GZMAP12544 262 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 ERCC2P18074 760 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 MIPP30301 263 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 ADKP55263 362 aaKnown RBP15.07■□□□□ 0
RN7SL560P-201ENST00000577943 KLHL30Q0D2K2 578 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 LRRC14Q15048 493 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 NR0B2Q15466 257 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 TBC1D25Q3MII6 688 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 SOWAHCQ53LP3 525 aaPredicted RBP15.07■□□□□ 0
RN7SL560P-201ENST00000577943 PPP6R3Q5H9R7 873 aaPredicted RBP15.07■□□□□ 0
RN7SL560P-201ENST00000577943 GUSBP11Q6P575 273 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 BRAT1Q6PJG6 821 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 RFX8Q6ZV50 586 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 EFL1Q7Z2Z2 1120 aaKnown RBP15.07■□□□□ 0
RN7SL560P-201ENST00000577943 CAMK1DQ8IU85 385 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 ARFGAP1Q8N6T3 406 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 PAF1Q8N7H5 531 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 FNIP1Q8TF40 1166 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 ZNF653Q96CK0 615 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 ZNF641Q96N77 438 aaPredicted RBP15.07■□□□□ 0
RN7SL560P-201ENST00000577943 TUBGCP5Q96RT8 1024 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 PEBP4Q96S96 227 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 KCTD15Q96SI1 283 aaPredicted RBP15.07■□□□□ 0
RN7SL560P-201ENST00000577943 CINPQ9BW66 212 aaPredicted RBP15.07■□□□□ 0
RN7SL560P-201ENST00000577943 TRIM7Q9C029 511 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 SP110Q9HB58 689 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 PCDH12Q9NPG4 1184 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 AIPL1Q9NZN9 384 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 PNMA8BQ9ULN7 279 aaPredicted RBP15.07■□□□□ 0
RN7SL560P-201ENST00000577943 DOLKQ9UPQ8 538 aa15.07■□□□□ 0
RN7SL560P-201ENST00000577943 A0A1W2PQC6 194 aa15.06■□□□□ 0
RN7SL560P-201ENST00000577943 TSPAN11A1L157 253 aa15.06■□□□□ 0
RN7SL560P-201ENST00000577943 EME2A4GXA9 379 aaPredicted RBP15.06■□□□□ 0
RN7SL560P-201ENST00000577943 DFFAO00273 331 aa15.06■□□□□ 0
RN7SL560P-201ENST00000577943 LZTS3O60299 673 aaPredicted RBP15.06■□□□□ 0
RN7SL560P-201ENST00000577943 BUB1BO60566 1050 aaPredicted RBP15.06■□□□□ 0
RN7SL560P-201ENST00000577943 USP12O75317 370 aa15.06■□□□□ 0
RN7SL560P-201ENST00000577943 MPOP05164 745 aa15.06■□□□□ 0
RN7SL560P-201ENST00000577943 C6P13671 934 aa15.06■□□□□ 0
RN7SL560P-201ENST00000577943 TGM2P21980 687 aa15.06■□□□□ 0
RN7SL560P-201ENST00000577943 PRKCIP41743 596 aa15.06■□□□□ 0
RN7SL560P-201ENST00000577943 RPIAP49247 311 aa15.06■□□□□ 0
RN7SL560P-201ENST00000577943 ZNF165P49910 485 aa15.06■□□□□ 0
RN7SL560P-201ENST00000577943 BLKP51451 505 aa15.06■□□□□ 0
RN7SL560P-201ENST00000577943 E4F1Q66K89 784 aaPredicted RBP15.06■□□□□ 0
RN7SL560P-201ENST00000577943 SRLQ86TD4 932 aa15.06■□□□□ 0
RN7SL560P-201ENST00000577943 TSEN2Q8NCE0 465 aaKnown RBP15.06■□□□□ 0
RN7SL560P-201ENST00000577943 TBATAQ96M53 351 aa15.06■□□□□ 0
RN7SL560P-201ENST00000577943 LRRC61Q9BV99 259 aa15.06■□□□□ 0
RN7SL560P-201ENST00000577943 ATP13A3Q9H7F0 1226 aa15.06■□□□□ 0
RN7SL560P-201ENST00000577943 MYO1AQ9UBC5 1043 aa15.06■□□□□ 0
RN7SL560P-201ENST00000577943 ATP8A1Q9Y2Q0 1164 aa15.06■□□□□ 0
RN7SL560P-201ENST00000577943 SCINQ9Y6U3 715 aa15.06■□□□□ 0
RN7SL560P-201ENST00000577943 A0A1B0GTH6 734 aa15.05■□□□□ -0
RN7SL560P-201ENST00000577943 EIF4E1BA6NMX2 242 aaKnown RBP15.05■□□□□ -0
RN7SL560P-201ENST00000577943 TMEM110-MUSTN1A8MSY1 372 aa15.05■□□□□ -0
RN7SL560P-201ENST00000577943 LMO7DNF2Z398 122 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms