RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 PPHLN1Q8NEY8 458 aaKnown RBP12.56□□□□□ -0.4
TSEN54-204ENST00000577197 BRSK1Q8TDC3 778 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 CSGALNACT1Q8TDX6 532 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 UCMAQ8WVF2 138 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 CDKL2Q92772 493 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 BHMTQ93088 406 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 SGSM3Q96HU1 749 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 ZFYVE19Q96K21 471 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 EBF3Q9H4W6 596 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 ATP13A3Q9H7F0 1226 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 TMBIM4Q9HC24 238 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 SYBUQ9NX95 663 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 ELOVL2Q9NXB9 296 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 RABGEF1Q9UJ41 708 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 DUSP12Q9UNI6 340 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 ERVW-1Q9UQF0 538 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 PPIL1Q9Y3C6 166 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 STARD13Q9Y3M8 1113 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 TCAF1Q9Y4C2 921 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 MAD1L1Q9Y6D9 718 aa12.56□□□□□ -0.4
TSEN54-204ENST00000577197 MROH6A6NGR9 719 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 SIN3BO75182 1162 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 POP4O95707 220 aaKnown RBP12.55□□□□□ -0.4
TSEN54-204ENST00000577197 SYF2O95926 243 aaKnown RBP12.55□□□□□ -0.4
TSEN54-204ENST00000577197 MT-CO1P00395 513 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 C1QAP02745 245 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 ARSAP15289 507 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 SERPINA4P29622 427 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 SSTR1P30872 391 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 GJA4P35212 333 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 GRIA2P42262 883 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 SESN2P58004 480 aaPredicted RBP12.55□□□□□ -0.4
TSEN54-204ENST00000577197 ST8SIA6P61647 398 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 KRT71Q3SY84 523 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 CARD16Q5EG05 197 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 PDPK2PQ6A1A2 396 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 ADGRD1Q6QNK2 874 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 GALNT7Q86SF2 657 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 RNF135Q8IUD6 432 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 ANKMY2Q8IV38 441 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 RAVER1Q8IY67 606 aaKnown RBP12.55□□□□□ -0.4
TSEN54-204ENST00000577197 NDUFAF2Q8N183 169 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.55□□□□□ -0.4
TSEN54-204ENST00000577197 ECHDC3Q96DC8 303 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 MRGPRX3Q96LB0 322 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 ATP6V1G3Q96LB4 118 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 LYSMD1Q96S90 227 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 OSBPL1AQ9BXW6 950 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 PLAC1Q9HBJ0 212 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 TREX1Q9NSU2 369 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 UBP1Q9NZI7 540 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 PSMC3IPQ9P2W1 217 aaPredicted RBP12.55□□□□□ -0.4
TSEN54-204ENST00000577197 RAI2Q9Y5P3 530 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.55□□□□□ -0.4
TSEN54-204ENST00000577197 RPS6KL1Q9Y6S9 549 aa12.55□□□□□ -0.4
TSEN54-204ENST00000577197 MUC22E2RYF6 1773 aaPredicted RBP12.55□□□□□ -0.4
TSEN54-204ENST00000577197 ZCWPW2A0A1B0GU75 182 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 TSPAN11A1L157 253 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 ANKRD66B4E2M5 251 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 TRAFD1O14545 582 aaPredicted RBP12.54□□□□□ -0.4
TSEN54-204ENST00000577197 SMAD6O43541 496 aaKnown RBP12.54□□□□□ -0.4
TSEN54-204ENST00000577197 USP12O75317 370 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 PGLSO95336 258 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 CRTAMO95727 393 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 PRLP01236 227 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 SHBGP04278 402 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 OPRD1P41143 372 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 RECQLP46063 649 aaPredicted RBP12.54□□□□□ -0.4
TSEN54-204ENST00000577197 RGRP47804 291 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 SERPINB9P50453 376 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 SUOXP51687 545 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 BCL2L1Q07817 233 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 MGAT5Q09328 741 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 DNAJC3Q13217 504 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 SPARCL1Q14515 664 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 IHHQ14623 411 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 DLG2Q15700 870 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 PTPRNQ16849 979 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 GEN1Q17RS7 908 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 MYLK3Q32MK0 819 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 ANKRD20A4Q4UJ75 823 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 SIRPB2Q5JXA9 342 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 ARMC12Q5T9G4 340 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 LGSNQ5TDP6 509 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 TMEM215Q68D42 235 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 CASC4Q6P4E1 433 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 BRAT1Q6PJG6 821 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 LINGO4Q6UY18 593 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 KIAA0408Q6ZU52 694 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 MARK2Q7KZI7 788 aaKnown RBP12.54□□□□□ -0.4
TSEN54-204ENST00000577197 SLC26A11Q86WA9 606 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 CNTN4Q8IWV2 1026 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 UBALD2Q8IYN6 164 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 MPP5Q8N3R9 675 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 FBF1Q8TES7 1133 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 FRS2Q8WU20 508 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 SLC44A1Q8WWI5 657 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 TLCD1Q96CP7 247 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 MTBPQ96DY7 904 aa12.54□□□□□ -0.4
TSEN54-204ENST00000577197 C8orf33Q9H7E9 229 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms