RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 DAAM2Q86T65 1068 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 CCDC50Q8IVM0 306 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 TXLNBQ8N3L3 684 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.4■□□□□ 0.06
SMG6-220ENST00000576218 FAM71BQ8TC56 605 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 HCAR2Q8TDS4 363 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 RNF25Q96BH1 459 aaPredicted RBP15.4■□□□□ 0.06
SMG6-220ENST00000576218 CAMK1GQ96NX5 476 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 NT5MQ9NPB1 228 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 PCDH12Q9NPG4 1184 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 IMPACTQ9P2X3 320 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.4■□□□□ 0.06
SMG6-220ENST00000576218 HEY1Q9Y5J3 304 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 EPN1Q9Y6I3 576 aaPredicted RBP15.4■□□□□ 0.06
SMG6-220ENST00000576218 A0A1B0GTQ1 180 aa15.39■□□□□ 0.05
SMG6-220ENST00000576218 LZTS3O60299 673 aaPredicted RBP15.39■□□□□ 0.05
SMG6-220ENST00000576218 BUB1BO60566 1050 aaPredicted RBP15.39■□□□□ 0.05
SMG6-220ENST00000576218 LCA5LO95447 670 aa15.39■□□□□ 0.05
SMG6-220ENST00000576218 TIMP2P16035 220 aa15.39■□□□□ 0.05
SMG6-220ENST00000576218 CDC25BP30305 580 aa15.39■□□□□ 0.05
SMG6-220ENST00000576218 GALNT2Q10471 571 aa15.39■□□□□ 0.05
SMG6-220ENST00000576218 FOXC1Q12948 553 aa15.39■□□□□ 0.05
SMG6-220ENST00000576218 TRIP6Q15654 476 aaKnown RBP15.39■□□□□ 0.05
SMG6-220ENST00000576218 HS1BP3Q53T59 392 aa15.39■□□□□ 0.05
SMG6-220ENST00000576218 LRRC38Q5VT99 294 aa15.39■□□□□ 0.05
SMG6-220ENST00000576218 TMEM145Q8NBT3 493 aa15.39■□□□□ 0.05
SMG6-220ENST00000576218 FAM174AQ8TBP5 190 aa15.39■□□□□ 0.05
SMG6-220ENST00000576218 RNF157Q96PX1 679 aa15.39■□□□□ 0.05
SMG6-220ENST00000576218 NUDCD1Q96RS6 583 aa15.39■□□□□ 0.05
SMG6-220ENST00000576218 POLR1EQ9GZS1 481 aaKnown RBP15.39■□□□□ 0.05
SMG6-220ENST00000576218 ATP8A1Q9Y2Q0 1164 aa15.39■□□□□ 0.05
SMG6-220ENST00000576218 TTC24A2A3L6 582 aaPredicted RBP15.38■□□□□ 0.05
SMG6-220ENST00000576218 GOLGA8CPA6NN73 597 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 AREL1O15033 823 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 MUSKO15146 869 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 PSTPIP1O43586 416 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 PCDHGA12O60330 932 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 CPP00450 1065 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 PRKCGP05129 697 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 KRT10P13645 584 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 ITIH2P19823 946 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 RABIFP47224 123 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 THOP1P52888 689 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 GBE1Q04446 702 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 TCEAL1Q15170 157 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 KAZNQ674X7 775 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 KYAT3Q6YP21 454 aaKnown RBP15.38■□□□□ 0.05
SMG6-220ENST00000576218 GCNT7Q6ZNI0 430 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 Q6ZSR6 202 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 GATAD2AQ86YP4 633 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 DENND6BQ8NEG7 585 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 OR13H1Q8NG92 308 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 FAF2Q96CS3 445 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 CDC6Q99741 560 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 MGME1Q9BQP7 344 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 C1QTNF2Q9BXJ5 285 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 FTSJ1Q9UET6 329 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 PCOLCE2Q9UKZ9 415 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 TFR2Q9UP52 801 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 HS3ST3A1Q9Y663 406 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 ALG6Q9Y672 507 aa15.38■□□□□ 0.05
SMG6-220ENST00000576218 NCOR2Q9Y618 2525 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 A0A0A6YYK5 440 aaPredicted RBP15.37■□□□□ 0.05
SMG6-220ENST00000576218 A0A1W2PQ67 120 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 TSPAN11A1L157 253 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 C10orf142B7Z368 130 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 PPP1R12AO14974 1030 aaPredicted RBP15.37■□□□□ 0.05
SMG6-220ENST00000576218 MATN3O15232 486 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 SDC3O75056 442 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 SOCS5O75159 536 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 ELFN1P0C7U0 828 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 CA4P22748 312 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 CCNCP24863 283 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 EPHA8P29322 1005 aaPredicted RBP15.37■□□□□ 0.05
SMG6-220ENST00000576218 EPHB1P54762 984 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 SEMG2Q02383 582 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 AP1B1Q10567 949 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 PDE1CQ14123 709 aaPredicted RBP15.37■□□□□ 0.05
SMG6-220ENST00000576218 FGL2Q14314 439 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 CCDC157Q569K6 752 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 RALGPS1Q5JS13 557 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 C11orf63Q6NUN7 778 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 VSIG1Q86XK7 387 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 SPATS2Q86XZ4 545 aaKnown RBP15.37■□□□□ 0.05
SMG6-220ENST00000576218 DCP2Q8IU60 420 aaKnown RBP15.37■□□□□ 0.05
SMG6-220ENST00000576218 CCDC13Q8IYE1 715 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 NDUFAF2Q8N183 169 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 PQLC3Q8N755 202 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 ACRBPQ8NEB7 543 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 CALR3Q96L12 384 aaKnown RBP15.37■□□□□ 0.05
SMG6-220ENST00000576218 GOLPH3Q9H4A6 298 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 ERVMER34-1Q9H9K5 563 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 NOD2Q9HC29 1040 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 RBM22Q9NW64 420 aaKnown RBP eCLIP15.37■□□□□ 0.05
SMG6-220ENST00000576218 DNAJC28Q9NX36 388 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 SEPT10Q9P0V9 454 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 APOBEC2Q9Y235 224 aaKnown RBP15.37■□□□□ 0.05
SMG6-220ENST00000576218 COQ6Q9Y2Z9 468 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 PCDHGC4Q9Y5F7 938 aa15.37■□□□□ 0.05
SMG6-220ENST00000576218 TRPM6Q9BX84 2022 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms