RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 RPS21P63220 83 aaKnown RBP15.35■□□□□ 0.05
LITAF-217ENST00000575426 PPP2CAP67775 309 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 IFI35P80217 286 aaPredicted RBP15.35■□□□□ 0.05
LITAF-217ENST00000575426 ADCY2Q08462 1091 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 XRCC4Q13426 336 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 UGP2Q16851 508 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 SLC45A4Q5BKX6 768 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 MEI1Q5TIA1 1274 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 KIAA1161Q6NSJ0 714 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 ERAP2Q6P179 960 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 ADAT2Q7Z6V5 191 aaKnown RBP15.35■□□□□ 0.05
LITAF-217ENST00000575426 ZSCAN30Q86W11 494 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 HORMAD1Q86X24 394 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 NDUFAF2Q8N183 169 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.35■□□□□ 0.05
LITAF-217ENST00000575426 TTC13Q8NBP0 860 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 CXorf40AQ8TE69 158 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 SKA1Q96BD8 255 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 IL12RB2Q99665 862 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 NOD2Q9HC29 1040 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 DMTF1Q9Y222 760 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 MYO15AQ9UKN7 3530 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 UPK3BL1B0FP48 263 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 PATE3B3GLJ2 98 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 UPK3BL2E5RIL1 263 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 LATO43561 262 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 SOCS5O75159 536 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 GJB3O75712 270 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 HLA-DQB2P05538 268 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 TGM1P22735 817 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 ABL2P42684 1182 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 AFF3P51826 1226 aaKnown RBP15.34■□□□□ 0.05
LITAF-217ENST00000575426 ATXN3P54252 364 aaPredicted RBP15.34■□□□□ 0.05
LITAF-217ENST00000575426 IRX4P78413 519 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 LMNB2Q03252 620 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 SGCGQ13326 291 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 NOMO1Q15155 1222 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 ARMC12Q5T9G4 340 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 AADACL2Q6P093 401 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 B4GALNT4Q76KP1 1039 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 KLK6Q92876 244 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 SERAC1Q96JX3 654 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 KCNF1Q9H3M0 494 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 AASDHPPTQ9NRN7 309 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 ATP8A1Q9Y2Q0 1164 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 PCDHGC4Q9Y5F7 938 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.34■□□□□ 0.05
LITAF-217ENST00000575426 PIEZO1Q92508 2521 aa15.34■□□□□ 0.05
LITAF-217ENST00000575426 TSPAN11A1L157 253 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 SLC31A1O15431 190 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 MSNP26038 577 aaKnown RBP15.33■□□□□ 0.04
LITAF-217ENST00000575426 EIF3EP60228 445 aaKnown RBP15.33■□□□□ 0.04
LITAF-217ENST00000575426 RACK1P63244 317 aaKnown RBP15.33■□□□□ 0.04
LITAF-217ENST00000575426 FAM193AP78312 1265 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 ARHGAP8P85298 464 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 OTUD4Q01804 1114 aaKnown RBP15.33■□□□□ 0.04
LITAF-217ENST00000575426 DSC2Q02487 901 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 STAT4Q14765 748 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 PRKD1Q15139 912 aaPredicted RBP15.33■□□□□ 0.04
LITAF-217ENST00000575426 TEX44Q53QW1 395 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 LRRC73Q5JTD7 316 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 TCEAL6Q6IPX3 200 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 ACTL9Q8TC94 416 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 TCEAL3Q969E4 200 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 VOPP1Q96AW1 172 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 ECHDC3Q96DC8 303 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 AGAP3Q96P47 875 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 VAT1Q99536 393 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 SLC17A9Q9BYT1 436 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 TM9SF3Q9HD45 589 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 PHTF1Q9UMS5 762 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 ZNF292O60281 2723 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 CACNA1EQ15878 2313 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 TMEM131Q92545 1883 aa15.33■□□□□ 0.04
LITAF-217ENST00000575426 PRAMEF26H0Y7S4 382 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 TRAFD1O14545 582 aaPredicted RBP15.32■□□□□ 0.04
LITAF-217ENST00000575426 RIOK3O14730 519 aaKnown RBP15.32■□□□□ 0.04
LITAF-217ENST00000575426 AREL1O15033 823 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 HTRA2O43464 458 aaPredicted RBP15.32■□□□□ 0.04
LITAF-217ENST00000575426 ZNF189O75820 626 aaPredicted RBP15.32■□□□□ 0.04
LITAF-217ENST00000575426 STK10O94804 968 aaKnown RBP15.32■□□□□ 0.04
LITAF-217ENST00000575426 CPP00450 1065 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 CD38P28907 300 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 AKT2P31751 481 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 CSNK1EP49674 416 aaKnown RBP15.32■□□□□ 0.04
LITAF-217ENST00000575426 EPHB1P54762 984 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 C21orf59P57076 290 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 ZBTB17Q13105 803 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 ZNF284Q2VY69 593 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 ALG1LQ6GMV1 187 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 NAPEPLDQ6IQ20 393 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 DARS2Q6PI48 645 aaKnown RBP15.32■□□□□ 0.04
LITAF-217ENST00000575426 CDKL3Q8IVW4 592 aaPredicted RBP15.32■□□□□ 0.04
LITAF-217ENST00000575426 HTR3CQ8WXA8 447 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 QKIQ96PU8 341 aaKnown RBP eCLIP15.32■□□□□ 0.04
LITAF-217ENST00000575426 EDEM2Q9BV94 578 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 GTPBP2Q9BX10 602 aaKnown RBP15.32■□□□□ 0.04
LITAF-217ENST00000575426 C1QTNF7Q9BXJ2 289 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 CEP41Q9BYV8 373 aa15.32■□□□□ 0.04
LITAF-217ENST00000575426 ZDHHC5Q9C0B5 715 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms