RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 INTS6Q9UL03 887 aaKnown RBP5.09□□□□□ -1.59
TSR1-203ENST00000575049 EXOC7Q9UPT5 735 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 KCNK7Q9Y2U2 307 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 ANGPTL3Q9Y5C1 460 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 VIRMAQ69YN4 1812 aaKnown RBP5.09□□□□□ -1.6
TSR1-203ENST00000575049 ASXL1Q8IXJ9 1541 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 FAM135AQ9P2D6 1515 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 KANK1Q14678 1352 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 IBTKQ9P2D0 1353 aaPredicted RBP5.08□□□□□ -1.6
TSR1-203ENST00000575049 AOX1Q06278 1338 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 TBC1D3DA0A087WVF3 549 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 TBC1D3IA0A087WXS9 549 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 TBC1D3EA0A087X179 549 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 TBC1D3KA0A087X1G2 549 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 TBC1D3BA6NDS4 549 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 TBC1D3FA6NER0 549 aaPredicted RBP5.08□□□□□ -1.6
TSR1-203ENST00000575049 TBC1D3LB9A6J9 549 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 M0QZQ0 153 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 PER2O15055 1255 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 PAPSS1O43252 624 aaPredicted RBP5.08□□□□□ -1.6
TSR1-203ENST00000575049 RIPK2O43353 540 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 SCAF4O95104 1147 aaKnown RBP5.08□□□□□ -1.6
TSR1-203ENST00000575049 PDHA1P08559 390 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 CCDC159P0C7I6 412 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 TBC1D3HP0C7X1 549 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 LYL1P12980 280 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 FERP16591 822 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 ZNF8P17098 575 aaPredicted RBP5.08□□□□□ -1.6
TSR1-203ENST00000575049 TRIM21P19474 475 aaKnown RBP5.08□□□□□ -1.6
TSR1-203ENST00000575049 AGAP20933 346 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 TACR2P21452 398 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 IL4RP24394 825 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 MC5RP33032 325 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 HNF1BP35680 557 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 PBX1P40424 430 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 GSTM5P46439 218 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 PCP4P48539 62 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 GATMP50440 423 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 ZNF81P51508 661 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 BMXP51813 675 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 ZNF134P52741 427 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 PRKAG1P54619 331 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 YPEL5P62699 121 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 SATB1Q01826 763 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 NHLH2Q02577 135 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 GOLGA8FQ08AF8 430 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 CCDC173Q0VFZ6 552 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 LMAN2Q12907 356 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 NPRL3Q12980 569 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 SGCGQ13326 291 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 GRAPQ13588 217 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 UBXN2BQ14CS0 331 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 LSM12Q3MHD2 195 aaKnown RBP5.08□□□□□ -1.6
TSR1-203ENST00000575049 ANKRD20A4Q4UJ75 823 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 ANKRD20A8PQ5CZ79 823 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 ANKRD20A2Q5SQ80 823 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 SH2D4BQ5SQS7 431 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 ANKRD20A1Q5TYW2 823 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 ANKRD20A3Q5VUR7 823 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 TBC1D3GQ6DHY5 549 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 JADE1Q6IE81 842 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 TBC1D3CQ6IPX1 549 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 CCDC144NLQ6NUI1 221 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 TMEM81Q6P7N7 255 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 GBP6Q6ZN66 633 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 SLC46A3Q7Z3Q1 461 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 WDR63Q8IWG1 891 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 TBC1D3Q8IZP1 549 aaPredicted RBP5.08□□□□□ -1.6
TSR1-203ENST00000575049 FSTL5Q8N475 847 aaPredicted RBP5.08□□□□□ -1.6
TSR1-203ENST00000575049 PI4KAP1Q8N8J0 262 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 MIGA1Q8NAN2 632 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 CNNM3Q8NE01 707 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 CNDP1Q96KN2 507 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 FAM118BQ9BPY3 351 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 RWDD1Q9H446 243 aaPredicted RBP5.08□□□□□ -1.6
TSR1-203ENST00000575049 EPHX3Q9H6B9 360 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 CXorf36Q9H7Y0 433 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 KCNK9Q9NPC2 374 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 ABCB8Q9NUT2 735 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 FAM30AQ9NZY2 134 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 LRIT1Q9P2V4 623 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 HSPB7Q9UBY9 170 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 SLC12A4Q9UP95 1085 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 MTMR6Q9Y217 621 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 SLC27A6Q9Y2P4 619 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 KIF3AQ9Y496 699 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 NFS1Q9Y697 457 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 SYNMO15061 1565 aa5.08□□□□□ -1.6
TSR1-203ENST00000575049 ARHGAP31Q2M1Z3 1444 aa5.07□□□□□ -1.6
TSR1-203ENST00000575049 ATP8B3O60423 1300 aa5.07□□□□□ -1.6
TSR1-203ENST00000575049 CDHR4A6H8M9 788 aa5.07□□□□□ -1.6
TSR1-203ENST00000575049 AKR1B15C9JRZ8 316 aaPredicted RBP5.07□□□□□ -1.6
TSR1-203ENST00000575049 BOLA2-SMG1P6H3BVE0 249 aa5.07□□□□□ -1.6
TSR1-203ENST00000575049 GRM8O00222 908 aa5.07□□□□□ -1.6
TSR1-203ENST00000575049 VEGFDO43915 354 aa5.07□□□□□ -1.6
TSR1-203ENST00000575049 PALMO75781 387 aa5.07□□□□□ -1.6
TSR1-203ENST00000575049 RECQL4O94761 1208 aa5.07□□□□□ -1.6
TSR1-203ENST00000575049 SEC31AO94979 1220 aaKnown RBP5.07□□□□□ -1.6
TSR1-203ENST00000575049 SIX3O95343 332 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms