RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 RFPL2O75678 378 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 GSTA1P08263 222 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 GPR158Q5T848 1215 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 GALNT7Q86SF2 657 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 CMTM8Q8IZV2 173 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 C2CD4AQ8NCU7 369 aaPredicted RBP28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 OR13J1Q8NGT2 312 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 GABPB2Q8TAK5 448 aaPredicted RBP28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 WFDC5Q8TCV5 224 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 CALML6Q8TD86 181 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 NSMCE3Q96MG7 304 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 LMCD1Q9NZU5 365 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 VPS28Q9UK41 221 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 GOLGA8TH3BQL2 631 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 SLC7A4O43246 635 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 SNAP91O60641 907 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 TMCC1O94876 653 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 AHSGP02765 367 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 GABRB3P28472 473 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 CSKP41240 450 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 THOC5Q13769 683 aaKnown RBP28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 NEPROQ6NW34 567 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 MFN1Q8IWA4 741 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 TRIM42Q8IWZ5 723 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 LMNTD2Q8IXW0 634 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 FIBINQ8TAL6 211 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 RAB3IL1Q8TBN0 382 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 BRSK1Q8TDC3 778 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 DDI1Q8WTU0 396 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 PTPRN2Q92932 1015 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 GAS2L1Q99501 681 aaPredicted RBP28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 SCUBE2Q9NQ36 999 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 SIRPGQ9P1W8 387 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 ZMYM5Q9UJ78 669 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 SZT2Q5T011 3432 aa28.65■■■□□ 2.18
CTDNEP1-210ENST00000574322 TRANK1O15050 2925 aa28.64■■■□□ 2.18
CTDNEP1-210ENST00000574322 RHOP08100 348 aa28.64■■■□□ 2.18
CTDNEP1-210ENST00000574322 IGFBP4P22692 258 aa28.64■■■□□ 2.18
CTDNEP1-210ENST00000574322 NUMBP49757 651 aa28.64■■■□□ 2.18
CTDNEP1-210ENST00000574322 SCNN1BP51168 640 aa28.64■■■□□ 2.18
CTDNEP1-210ENST00000574322 ADGRE1Q14246 886 aa28.64■■■□□ 2.18
CTDNEP1-210ENST00000574322 ARHGAP15Q53QZ3 475 aa28.64■■■□□ 2.18
CTDNEP1-210ENST00000574322 DEFB123Q8N688 67 aa28.64■■■□□ 2.18
CTDNEP1-210ENST00000574322 PLCD4Q9BRC7 762 aa28.64■■■□□ 2.18
CTDNEP1-210ENST00000574322 SLCO1B3Q9NPD5 702 aa28.64■■■□□ 2.18
CTDNEP1-210ENST00000574322 VPS51Q9UID3 782 aa28.64■■■□□ 2.18
CTDNEP1-210ENST00000574322 XYLBO75191 536 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 EPCAMP16422 314 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 PLK1P53350 603 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 FAM47EQ6ZV65 393 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 ADGRD2Q7Z7M1 963 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 CLEC14AQ86T13 490 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 RBM23Q86U06 439 aaKnown RBP28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 ARMC2Q8NEN0 867 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 SH3RF2Q8TEC5 729 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 ACDQ96AP0 544 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 TCEAL4Q96EI5 215 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 TDRD1Q9BXT4 1180 aaKnown RBP28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 ZDHHC7Q9NXF8 308 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 LHX3Q9UBR4 397 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 DPP7Q9UHL4 492 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 GGT7Q9UJ14 662 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 EMCNQ9ULC0 261 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 NOTCH4Q99466 2003 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 WDR91A4D1P6 747 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 IFT88Q13099 833 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 PPP2R3CQ969Q6 453 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 C2orf49Q9BVC5 232 aaPredicted RBP28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 MFSD1Q9H3U5 465 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 NSUN3Q9H649 340 aaKnown RBP28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 KIAA1522Q9P206 1035 aaPredicted RBP28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 FBXO5Q9UKT4 447 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 ARL2BPQ9Y2Y0 163 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 DOCK6Q96HP0 2047 aa28.63■■■□□ 2.17
CTDNEP1-210ENST00000574322 PER2O15055 1255 aa28.62■■■□□ 2.17
CTDNEP1-210ENST00000574322 PRLP01236 227 aa28.62■■■□□ 2.17
CTDNEP1-210ENST00000574322 PSMA3P25788 255 aa28.62■■■□□ 2.17
CTDNEP1-210ENST00000574322 AVPR1AP37288 418 aa28.62■■■□□ 2.17
CTDNEP1-210ENST00000574322 SLC1A2P43004 574 aa28.62■■■□□ 2.17
CTDNEP1-210ENST00000574322 TEAD2Q15562 447 aa28.62■■■□□ 2.17
CTDNEP1-210ENST00000574322 PRSS36Q5K4E3 855 aa28.62■■■□□ 2.17
CTDNEP1-210ENST00000574322 DENND6AQ8IWF6 608 aa28.62■■■□□ 2.17
CTDNEP1-210ENST00000574322 TLE6Q9H808 572 aa28.62■■■□□ 2.17
CTDNEP1-210ENST00000574322 MTCH2Q9Y6C9 303 aa28.62■■■□□ 2.17
CTDNEP1-210ENST00000574322 PLIN3O60664 434 aa28.61■■■□□ 2.17
CTDNEP1-210ENST00000574322 GSRP00390 522 aa28.61■■■□□ 2.17
CTDNEP1-210ENST00000574322 BPGMP07738 259 aa28.61■■■□□ 2.17
CTDNEP1-210ENST00000574322 TCF3P15923 654 aa28.61■■■□□ 2.17
CTDNEP1-210ENST00000574322 ILF2Q12905 390 aaKnown RBP28.61■■■□□ 2.17
CTDNEP1-210ENST00000574322 GRM3Q14832 879 aa28.61■■■□□ 2.17
CTDNEP1-210ENST00000574322 PPM1JQ5JR12 505 aa28.61■■■□□ 2.17
CTDNEP1-210ENST00000574322 RETSATQ6NUM9 610 aa28.61■■■□□ 2.17
CTDNEP1-210ENST00000574322 NCEH1Q6PIU2 408 aa28.61■■■□□ 2.17
CTDNEP1-210ENST00000574322 OTOAQ7RTW8 1153 aa28.61■■■□□ 2.17
CTDNEP1-210ENST00000574322 CMC1Q7Z7K0 106 aa28.61■■■□□ 2.17
CTDNEP1-210ENST00000574322 LCA5Q86VQ0 697 aa28.61■■■□□ 2.17
CTDNEP1-210ENST00000574322 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP28.61■■■□□ 2.179e-8■■□□□ 13.7
CTDNEP1-210ENST00000574322 MYO7AQ13402 2215 aa28.61■■■□□ 2.17
CTDNEP1-210ENST00000574322 CTBP1Q13363 440 aa28.6■■■□□ 2.17
CTDNEP1-210ENST00000574322 SLC12A1Q13621 1099 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms