RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 RGRP47804 291 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 RXRGP48443 463 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 NDST2P52849 883 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 SEMG2Q02383 582 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 RAD51Q06609 339 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 ACAP1Q15027 740 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 INO80DQ53TQ3 878 aaPredicted RBP10.1□□□□□ -0.79
RPA1-206ENST00000573994 ZNF542PQ5EBM4 170 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 TPRG1LQ5T0D9 272 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 CCDC122Q5T0U0 273 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 AFMIDQ63HM1 303 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 KYAT3Q6YP21 454 aaKnown RBP10.1□□□□□ -0.79
RPA1-206ENST00000573994 Q6ZSR6 202 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 KANSL1Q7Z3B3 1105 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 ABI3BPQ7Z7G0 1075 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 TTC7BQ86TV6 843 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 CPNE8Q86YQ8 564 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 CYP4X1Q8N118 509 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 TSEN2Q8NCE0 465 aaKnown RBP10.1□□□□□ -0.79
RPA1-206ENST00000573994 FEM1CQ96JP0 617 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 TSPY26PQ9H489 355 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 ETNK2Q9NVF9 386 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 UCKL1Q9NWZ5 548 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 DNAJC28Q9NX36 388 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 ZMIZ1Q9ULJ6 1067 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 LAMA5O15230 3695 aa10.1□□□□□ -0.79
RPA1-206ENST00000573994 PKD1L2Q7Z442 2459 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 TRIM38O00635 465 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 AREL1O15033 823 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 MUSKO15146 869 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 TSPAN6O43657 245 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 PALMO75781 387 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 DKK1O94907 266 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 LDOC1O95751 146 aaPredicted RBP10.09□□□□□ -0.79
RPA1-206ENST00000573994 CYP1A2P05177 515 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 TIMP2P16035 220 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 XPAP23025 273 aaPredicted RBP10.09□□□□□ -0.79
RPA1-206ENST00000573994 AMPD1P23109 780 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 IGFALSP35858 605 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 EIF4A3P38919 411 aaKnown RBP10.09□□□□□ -0.79
RPA1-206ENST00000573994 ARL4AP40617 200 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 ACADVLP49748 655 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 MMP16P51512 607 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 SLC25A11Q02978 314 aaKnown RBP10.09□□□□□ -0.79
RPA1-206ENST00000573994 SGCGQ13326 291 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 KRT81Q14533 505 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 DPYSL2Q16555 572 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 CFAP58Q5T655 872 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 ALKBH5Q6P6C2 394 aaKnown RBP10.09□□□□□ -0.79
RPA1-206ENST00000573994 ZSWIM9Q86XI8 627 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 CAMK1DQ8IU85 385 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 ZNF564Q8TBZ8 553 aaPredicted RBP10.09□□□□□ -0.79
RPA1-206ENST00000573994 CXorf40AQ8TE69 158 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 RAB7BQ96AH8 199 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 BMFQ96LC9 184 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 CSPG4P5Q96PW8 444 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 KLF6Q99612 283 aaPredicted RBP10.09□□□□□ -0.79
RPA1-206ENST00000573994 CINPQ9BW66 212 aaPredicted RBP10.09□□□□□ -0.79
RPA1-206ENST00000573994 C1QTNF2Q9BXJ5 285 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 PACSIN1Q9BY11 444 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 PCDH12Q9NPG4 1184 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 PRDM9Q9NQV7 894 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 KLHL11Q9NVR0 708 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 IPO11Q9UI26 975 aaKnown RBP10.09□□□□□ -0.79
RPA1-206ENST00000573994 NENFQ9UMX5 172 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 COQ6Q9Y2Z9 468 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 CELSR3Q9NYQ7 3312 aa10.09□□□□□ -0.79
RPA1-206ENST00000573994 CHD6Q8TD26 2715 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 TTC24A2A3L6 582 aaPredicted RBP10.08□□□□□ -0.8
RPA1-206ENST00000573994 FAM221BA6H8Z2 402 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 TMEM110-MUSTN1A8MSY1 372 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 FPGTO14772 594 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 SIGLEC6O43699 453 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 BUB1BO60566 1050 aaPredicted RBP10.08□□□□□ -0.8
RPA1-206ENST00000573994 RFPL3O75679 317 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 PIAS2O75928 621 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 NEBLO76041 1014 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 RARAP10276 462 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 CDK4P11802 303 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 MYF5P13349 255 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 DGKAP23743 735 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 RABIFP47224 123 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 HCAR3P49019 387 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 PDE1CQ14123 709 aaPredicted RBP10.08□□□□□ -0.8
RPA1-206ENST00000573994 FZD2Q14332 565 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 PIGHQ14442 188 aaPredicted RBP10.08□□□□□ -0.8
RPA1-206ENST00000573994 GRM3Q14832 879 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 IRF4Q15306 451 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 SPECC1LQ69YQ0 1117 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 TMCO3Q6UWJ1 677 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 CCNI2Q6ZMN8 369 aaPredicted RBP10.08□□□□□ -0.8
RPA1-206ENST00000573994 POLNQ7Z5Q5 900 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 SLC25A45Q8N413 288 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 PAF1Q8N7H5 531 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 NIPA2Q8N8Q9 360 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 KDF1Q8NAX2 398 aaPredicted RBP10.08□□□□□ -0.8
RPA1-206ENST00000573994 HCAR2Q8TDS4 363 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 PCDH18Q9HCL0 1135 aa10.08□□□□□ -0.8
RPA1-206ENST00000573994 MBNL1Q9NR56 388 aaKnown RBP10.08□□□□□ -0.8
RPA1-206ENST00000573994 GPR27Q9NS67 375 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms