RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 PGLSO95336 258 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 APRTP07741 180 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 MMP2P08253 660 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 OXTRP30559 389 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 PTGIRP43119 386 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 TPMTP51580 245 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 METAP1P53582 386 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 MRPS25P82663 173 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 CDK18Q07002 472 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 PTK6Q13882 451 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 GALNT3Q14435 633 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 SLC14A2Q15849 920 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 USP39Q53GS9 565 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 SYCP2LQ5T4T6 812 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 ERAP2Q6P179 960 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 PPP1R21Q6ZMI0 780 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 USP30Q70CQ3 517 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 PARS2Q7L3T8 475 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 LONP2Q86WA8 852 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 RASSF3Q86WH2 238 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 JAMLQ86YT9 394 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 SLC25A41Q8N5S1 370 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 AADATQ8N5Z0 425 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 PDCD7Q8N8D1 485 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 OR14C36Q8NHC7 312 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 HCAR2Q8TDS4 363 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 SLCO2A1Q92959 643 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 ARRDC3Q96B67 414 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 OXNAD1Q96HP4 312 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 FEM1CQ96JP0 617 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 MLPHQ9BV36 600 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 FICDQ9BVA6 458 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 HDAC8Q9BY41 377 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 LRRC40Q9H9A6 602 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 ETNK1Q9HBU6 452 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 DKK3Q9UBP4 350 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 EBF1Q9UH73 591 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 FBXO4Q9UKT5 387 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 PHTF1Q9UMS5 762 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 CHKBQ9Y259 395 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 ARIH1Q9Y4X5 557 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 KIAA1549LQ6ZVL6 1849 aa9.52□□□□□ -0.89
NPLOC4-208ENST00000572351 TSPAN11A1L157 253 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 PRR23AA6NEV1 266 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 FAM187AA6NFU0 413 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 FAM47DPA6NHR8 397 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 ERI2A8K979 691 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 EFCAB8A8MWE9 144 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 UPK3BL1B0FP48 263 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 UPK3BL2E5RIL1 263 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 TRAFD1O14545 582 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 SLC7A4O43246 635 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 HTRA2O43464 458 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 RAD51CO43502 376 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 NDUFS2O75306 463 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 AP2A1O95782 977 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 NDST3O95803 873 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 ADRB3P13945 408 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 CTPS1P17812 591 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 HLA-DPA1P20036 260 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 P2RY2P41231 377 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 GRIA4P48058 902 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 FNTBP49356 437 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 SUOXP51687 545 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 RPL26P61254 145 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 FAM193AP78312 1265 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 SARNPP82979 210 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 DMWDQ09019 674 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 SEMA5AQ13591 1074 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 SPARCL1Q14515 664 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 ANGPT1Q15389 498 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 UGP2Q16851 508 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 LRRC73Q5JTD7 316 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 KDELC1Q6UW63 502 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 USP45Q70EL2 814 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 LINC00523Q86TU6 105 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 RLN3Q8WXF3 142 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 RAB7BQ96AH8 199 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 ECHDC3Q96DC8 303 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 MRGPRX2Q96LB1 330 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 NSMCE3Q96MG7 304 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 TBL1YQ9BQ87 522 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 APOL2Q9BQE5 337 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 TRIM51Q9BSJ1 452 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 LRFN3Q9BTN0 628 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 TRIM31Q9BZY9 425 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 BTBD1Q9H0C5 482 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 RAB17Q9H0T7 212 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 NEUROG2Q9H2A3 272 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 L2HGDHQ9H9P8 463 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 SGK2Q9HBY8 427 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 ITM2CQ9NQX7 267 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 SERGEFQ9UGK8 458 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 FZD4Q9ULV1 537 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 RPL26L1Q9UNX3 145 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 INVSQ9Y283 1065 aa9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 UTP11Q9Y3A2 253 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-208ENST00000572351 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.5□□□□□ -0.89
NPLOC4-208ENST00000572351 CCDC163A0A0D9SF12 145 aa9.5□□□□□ -0.89
NPLOC4-208ENST00000572351 LRRC72A6NJI9 287 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms