RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 TMEM52BQ4KMG9 183 aa17.5■□□□□ 0.39
LITAF-211ENST00000572255 PPP6R3Q5H9R7 873 aaPredicted RBP17.5■□□□□ 0.39
LITAF-211ENST00000572255 AFMIDQ63HM1 303 aa17.5■□□□□ 0.39
LITAF-211ENST00000572255 ZCCHC8Q6NZY4 707 aaKnown RBP17.5■□□□□ 0.39
LITAF-211ENST00000572255 PDZD3Q86UT5 571 aa17.5■□□□□ 0.39
LITAF-211ENST00000572255 PSTKQ8IV42 348 aaKnown RBP17.5■□□□□ 0.39
LITAF-211ENST00000572255 ARHGAP12Q8IWW6 846 aa17.5■□□□□ 0.39
LITAF-211ENST00000572255 TP53I13Q8NBR0 393 aaPredicted RBP17.5■□□□□ 0.39
LITAF-211ENST00000572255 LMX1AQ8TE12 382 aa17.5■□□□□ 0.39
LITAF-211ENST00000572255 TRIM11Q96F44 468 aa17.5■□□□□ 0.39
LITAF-211ENST00000572255 FUCA2Q9BTY2 467 aa17.5■□□□□ 0.39
LITAF-211ENST00000572255 USP29Q9HBJ7 922 aa17.5■□□□□ 0.39
LITAF-211ENST00000572255 PCDH12Q9NPG4 1184 aa17.5■□□□□ 0.39
LITAF-211ENST00000572255 MBNL1Q9NR56 388 aaKnown RBP17.5■□□□□ 0.39
LITAF-211ENST00000572255 EVA1BQ9NVM1 165 aa17.5■□□□□ 0.39
LITAF-211ENST00000572255 MYO1AQ9UBC5 1043 aa17.5■□□□□ 0.39
LITAF-211ENST00000572255 ATRXP46100 2492 aa17.49■□□□□ 0.39
LITAF-211ENST00000572255 BUB1BO60566 1050 aaPredicted RBP17.49■□□□□ 0.39
LITAF-211ENST00000572255 GP1BAP07359 652 aa17.49■□□□□ 0.39
LITAF-211ENST00000572255 MYBL1P10243 752 aa17.49■□□□□ 0.39
LITAF-211ENST00000572255 RGRP47804 291 aa17.49■□□□□ 0.39
LITAF-211ENST00000572255 IRF4Q15306 451 aa17.49■□□□□ 0.39
LITAF-211ENST00000572255 UGP2Q16851 508 aa17.49■□□□□ 0.39
LITAF-211ENST00000572255 FIGNQ5HY92 759 aa17.49■□□□□ 0.39
LITAF-211ENST00000572255 CFAP58Q5T655 872 aa17.49■□□□□ 0.39
LITAF-211ENST00000572255 RBFAQ8N0V3 343 aa17.49■□□□□ 0.39
LITAF-211ENST00000572255 NPWQ8N729 165 aa17.49■□□□□ 0.39
LITAF-211ENST00000572255 TSEN2Q8NCE0 465 aaKnown RBP17.49■□□□□ 0.39
LITAF-211ENST00000572255 BTN2A2Q8WVV5 523 aa17.49■□□□□ 0.39
LITAF-211ENST00000572255 ZNF641Q96N77 438 aaPredicted RBP17.49■□□□□ 0.39
LITAF-211ENST00000572255 DCBLD2Q96PD2 775 aa17.49■□□□□ 0.39
LITAF-211ENST00000572255 TUBGCP5Q96RT8 1024 aa17.49■□□□□ 0.39
LITAF-211ENST00000572255 TCEAL2Q9H3H9 227 aaPredicted RBP17.49■□□□□ 0.39
LITAF-211ENST00000572255 MRPL47Q9HD33 250 aaKnown RBP17.49■□□□□ 0.39
LITAF-211ENST00000572255 APOBEC3BQ9UH17 382 aaKnown RBP17.49■□□□□ 0.39
LITAF-211ENST00000572255 PNMA8BQ9ULN7 279 aaPredicted RBP17.49■□□□□ 0.39
LITAF-211ENST00000572255 COQ6Q9Y2Z9 468 aa17.49■□□□□ 0.39
LITAF-211ENST00000572255 DFFAO00273 331 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 TOR1BO14657 336 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 PALMO75781 387 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 C6P13671 934 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 HOXB3P14651 431 aaPredicted RBP17.48■□□□□ 0.39
LITAF-211ENST00000572255 CSNK1DP48730 415 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 HCAR3P49019 387 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 ZNF135P52742 658 aaPredicted RBP17.48■□□□□ 0.39
LITAF-211ENST00000572255 DEFB133Q30KQ1 61 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 CDCP2Q5VXM1 449 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 ERAP2Q6P179 960 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 BRAT1Q6PJG6 821 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 MACC1Q6ZN28 852 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 SRLQ86TD4 932 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 ZSWIM9Q86XI8 627 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 CAMK1DQ8IU85 385 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 PHACTR4Q8IZ21 702 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 IFI44Q8TCB0 444 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 IL12RB2Q99665 862 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 ISCUQ9H1K1 167 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 ATP13A3Q9H7F0 1226 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 SP110Q9HB58 689 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 NCKIPSDQ9NZQ3 722 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 CWC15Q9P013 229 aaKnown RBP17.48■□□□□ 0.39
LITAF-211ENST00000572255 SPASTQ9UBP0 616 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 SALL4Q9UJQ4 1053 aa17.48■□□□□ 0.39
LITAF-211ENST00000572255 ASXL3Q9C0F0 2248 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 RIOK3O14730 519 aaKnown RBP17.47■□□□□ 0.39
LITAF-211ENST00000572255 TPP1O14773 563 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 TLX3O43711 291 aaPredicted RBP17.47■□□□□ 0.39
LITAF-211ENST00000572255 GCATO75600 419 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 SERPINA4P29622 427 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 PCK1P35558 622 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 EIF4A3P38919 411 aaKnown RBP17.47■□□□□ 0.39
LITAF-211ENST00000572255 MMP12P39900 470 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 IL10RBQ08334 325 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 C1orf61Q13536 156 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 DPYSQ14117 519 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 LRRC14Q15048 493 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 WSCD2Q2TBF2 565 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 TDRD12Q587J7 1177 aaKnown RBP17.47■□□□□ 0.39
LITAF-211ENST00000572255 PRRT3Q5FWE3 981 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 ARHGAP36Q6ZRI8 547 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 LRRC61Q9BV99 259 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 CINPQ9BW66 212 aaPredicted RBP17.47■□□□□ 0.39
LITAF-211ENST00000572255 SLC13A1Q9BZW2 595 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 CBX8Q9HC52 389 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 ATP8A1Q9Y2Q0 1164 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 PCDHB1Q9Y5F3 818 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 LOC400499M0QZD8 3231 aa17.47■□□□□ 0.39
LITAF-211ENST00000572255 LMO7DNF2Z398 122 aa17.46■□□□□ 0.39
LITAF-211ENST00000572255 H3BRJ5 948 aa17.46■□□□□ 0.39
LITAF-211ENST00000572255 BRINP1O60477 761 aa17.46■□□□□ 0.39
LITAF-211ENST00000572255 PRKCGP05129 697 aa17.46■□□□□ 0.39
LITAF-211ENST00000572255 IL1R2P27930 398 aa17.46■□□□□ 0.39
LITAF-211ENST00000572255 LIG3P49916 1009 aa17.46■□□□□ 0.39
LITAF-211ENST00000572255 ADKP55263 362 aaKnown RBP17.46■□□□□ 0.39
LITAF-211ENST00000572255 TPM4P67936 248 aa17.46■□□□□ 0.39
LITAF-211ENST00000572255 FANCCQ00597 558 aa17.46■□□□□ 0.39
LITAF-211ENST00000572255 RFTN1Q14699 578 aaPredicted RBP17.46■□□□□ 0.39
LITAF-211ENST00000572255 ACAP1Q15027 740 aa17.46■□□□□ 0.39
LITAF-211ENST00000572255 CDKN3Q16667 212 aa17.46■□□□□ 0.39
LITAF-211ENST00000572255 FAXCQ5TGI0 409 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms