RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 HDAC11Q96DB2 347 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 LENG8Q96PV6 779 aaPredicted RBP11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 NUDCD1Q96RS6 583 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 ERVMER34-1Q9H9K5 563 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 NOD2Q9HC29 1040 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 TM7SF3Q9NS93 570 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 PCDHGB2Q9Y5G2 931 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 HS3ST3A1Q9Y663 406 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 A0A1B0GTQ1 180 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 TTC24A2A3L6 582 aaPredicted RBP11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 H0Y8X5 98 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 NEMP1O14524 444 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 RIOK3O14730 519 aaKnown RBP11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 APOL1O14791 398 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 HTRA2O43464 458 aaPredicted RBP11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 MAGEC1O60732 1142 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 SOCS5O75159 536 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 PAK4O96013 591 aaPredicted RBP11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 CEACAM1P13688 526 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 TNNT1P13805 278 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 ZFXP17010 805 aaPredicted RBP11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 AKT2P31751 481 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 GSDMDP57764 484 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 FOXK2Q01167 660 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 BCL2L1Q07817 233 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 PPIDQ08752 370 aaKnown RBP11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 ELP6Q0PNE2 266 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 TMEM52BQ4KMG9 183 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 ALG1LQ6GMV1 187 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 GCNT7Q6ZNI0 430 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 ABI3BPQ7Z7G0 1075 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 DAAM2Q86T65 1068 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 SPATS2Q86XZ4 545 aaKnown RBP11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 KATNAL2Q8IYT4 538 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 FAM174AQ8TBP5 190 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 BMFQ96LC9 184 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 OLFM3Q96PB7 478 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 ELF4Q99607 663 aaPredicted RBP11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 KLF6Q99612 283 aaPredicted RBP11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 MAK16Q9BXY0 300 aaKnown RBP11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 FZD3Q9NPG1 666 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 PCDH12Q9NPG4 1184 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 GDF3Q9NR23 364 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 GPR27Q9NS67 375 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 AMACRQ9UHK6 382 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 CA5BQ9Y2D0 317 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 SHROOM3Q8TF72 1996 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 TMEM131Q92545 1883 aa11.17□□□□□ -0.62
SHCBP1-207ENST00000569702 SPEGQ15772 3267 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 A0A1W2PQ67 120 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 MED19A0JLT2 244 aaPredicted RBP11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 GOLGA6L6A8MZA4 724 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 GIPC1O14908 333 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 RAD51BO15315 384 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 PCDHGA12O60330 932 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 MMP20O60882 483 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 CBFA2T3O75081 653 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 ZRANB2O95218 330 aaKnown RBP eCLIP11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 CCNB1P14635 433 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 CTNNA1P35221 906 aaKnown RBP11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 MMP12P39900 470 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 RXRGP48443 463 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 MARCKSL1P49006 195 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 NOVA1P51513 510 aaKnown RBP11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 CLDN2P57739 230 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 MAXP61244 160 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 POLR2LP62875 67 aaKnown RBP11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 SGCGQ13326 291 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 SHBQ15464 509 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 ODF2Q5BJF6 829 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 PRAMEF14Q5SWL7 426 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 CFAP58Q5T655 872 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 PSAPL1Q6NUJ1 521 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 SPOCD1Q6ZMY3 1216 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 CCDC13Q8IYE1 715 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 RCOR2Q8IZ40 523 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 LRRC57Q8N9N7 239 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 DENND6BQ8NEG7 585 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 DEFB124Q8NES8 71 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 EXD1Q8NHP7 514 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 LRRN4Q8WUT4 740 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 KRT35Q92764 455 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 CENPTQ96BT3 561 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 KLHDC7BQ96G42 594 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 LGMNQ99538 433 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 MYOCQ99972 504 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 DESI2Q9BSY9 194 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 SLC32A1Q9H598 525 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 NT5MQ9NPB1 228 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 SCUBE2Q9NQ36 999 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 ATP8A1Q9Y2Q0 1164 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 PCDHGC4Q9Y5F7 938 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 PCDHA3Q9Y5H8 950 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 HEY1Q9Y5J3 304 aa11.16□□□□□ -0.62
SHCBP1-207ENST00000569702 ANKRD36A6QL64 1941 aa11.15□□□□□ -0.62
SHCBP1-207ENST00000569702 A0A0U1RQJ8 604 aa11.15□□□□□ -0.62
SHCBP1-207ENST00000569702 GRID2IPA4D2P6 1211 aa11.15□□□□□ -0.62
SHCBP1-207ENST00000569702 CFAP69A5D8W1 941 aa11.15□□□□□ -0.62
SHCBP1-207ENST00000569702 POM121BA6NF01 834 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms