RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 TSGA13Q96PP4 275 aa13.95□□□□□ -0.18
HERPUD1-218ENST00000569569 NUDCD1Q96RS6 583 aa13.95□□□□□ -0.18
HERPUD1-218ENST00000569569 MGME1Q9BQP7 344 aa13.95□□□□□ -0.18
HERPUD1-218ENST00000569569 C1QTNF2Q9BXJ5 285 aa13.95□□□□□ -0.18
HERPUD1-218ENST00000569569 GDF3Q9NR23 364 aa13.95□□□□□ -0.18
HERPUD1-218ENST00000569569 ITM2BQ9Y287 266 aa13.95□□□□□ -0.18
HERPUD1-218ENST00000569569 FNDC3AQ9Y2H6 1198 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-218ENST00000569569 REXO2Q9Y3B8 237 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-218ENST00000569569 PCDHGB2Q9Y5G2 931 aa13.95□□□□□ -0.18
HERPUD1-218ENST00000569569 RCCD1A6NED2 376 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 IGLON5A6NGN9 336 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 H0Y8X5 98 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 APOL1O14791 398 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 MATN3O15232 486 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 PJA2O43164 708 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 SPINT1O43278 529 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 MAP3K6O95382 1288 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 ITIH2P19823 946 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 VAV2P52735 878 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 NAP1L1P55209 391 aaKnown RBP13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 NXPH1P58417 271 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 GBE1Q04446 702 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 SLC10A2Q12908 348 aaPredicted RBP13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 FGL2Q14314 439 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 TMEM52BQ4KMG9 183 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 LRRC73Q5JTD7 316 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 PSAPL1Q6NUJ1 521 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 ERAP2Q6P179 960 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 DBX2Q6ZNG2 339 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 DAAM2Q86T65 1068 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 TXLNBQ8N3L3 684 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 PGBD5Q8N414 524 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 PLD5Q8N7P1 536 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 ACRBPQ8NEB7 543 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 DEFB124Q8NES8 71 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 CXorf40AQ8TE69 158 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 MAML1Q92585 1016 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 HDAC11Q96DB2 347 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 ECHDC3Q96DC8 303 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 ZNF830Q96NB3 372 aaPredicted RBP13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 LENG8Q96PV6 779 aaPredicted RBP13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 ELF4Q99607 663 aaPredicted RBP13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 MYOCQ99972 504 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 GOLPH3Q9H4A6 298 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 ERVMER34-1Q9H9K5 563 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 FZD3Q9NPG1 666 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 SCUBE2Q9NQ36 999 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 HAUS2Q9NVX0 235 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 DTLQ9NZJ0 730 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 AMACRQ9UHK6 382 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 GGT7Q9UJ14 662 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 SALL4Q9UJQ4 1053 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 CA5BQ9Y2D0 317 aa13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.94□□□□□ -0.18
HERPUD1-218ENST00000569569 A0A1B0GTQ1 180 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 A0A1W2PQ67 120 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 TRAFD1O14545 582 aaPredicted RBP13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 RIOK3O14730 519 aaKnown RBP13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 SH3BP5O60239 455 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 MMP20O60882 483 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 TM7SF2O76062 418 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 CCT8P50990 548 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 GSDMDP57764 484 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 MAXP61244 160 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 PRAMEF14Q5SWL7 426 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 MFSD7Q6UXD7 560 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 KIAA1328Q86T90 577 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 RFX6Q8HWS3 928 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 OXR1Q8N573 874 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 PAF1Q8N7H5 531 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 CCNYQ8ND76 341 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 NSMCE3Q96MG7 304 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 LACRTQ9GZZ8 138 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 NOD2Q9HC29 1040 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 NT5MQ9NPB1 228 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 PCDH12Q9NPG4 1184 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 HEY1Q9Y5J3 304 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 DUSP10Q9Y6W6 482 aa13.93□□□□□ -0.18
HERPUD1-218ENST00000569569 MED19A0JLT2 244 aaPredicted RBP13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 TTC24A2A3L6 582 aaPredicted RBP13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 FPGTO14772 594 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 GIPC1O14908 333 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 YKT6O15498 198 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 HTRA2O43464 458 aaPredicted RBP13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 PCDHGA12O60330 932 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 SOCS5O75159 536 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 NEBLO76041 1014 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 ZRANB2O95218 330 aaKnown RBP eCLIP13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 THEGLP0DJG4 465 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 CCNB1P14635 433 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 CES1P23141 567 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 CDKN2BP42772 138 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 ARRB1P49407 418 aaPredicted RBP13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 PPIDQ08752 370 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 ITKQ08881 620 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 TFDP2Q14188 446 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 TAZQ16635 292 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 GCNT7Q6ZNI0 430 aa13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 BZW1Q7L1Q6 419 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-218ENST00000569569 ABI3BPQ7Z7G0 1075 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms