RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 CLIC5Q9NZA1 410 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 RPL26L1Q9UNX3 145 aaKnown RBP8.84□□□□□ -0.99
LINC00558-201ENST00000569422 NEU3Q9UQ49 428 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 RAD54BQ9Y620 910 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 SMNDC1O75940 238 aaKnown RBP eCLIP8.83□□□□□ -1
LINC00558-201ENST00000569422 S100BP04271 92 aaPredicted RBP8.83□□□□□ -1
LINC00558-201ENST00000569422 MSL3P1P0C860 447 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 GATMP50440 423 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 RPS6KA3P51812 740 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 FBXO48Q5FWF7 155 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 C10orf120Q5SQS8 335 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 FAM91A1Q658Y4 838 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 MRPL10Q7Z7H8 261 aaKnown RBP8.83□□□□□ -1
LINC00558-201ENST00000569422 FAM156AQ8NDB6 213 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 BLOC1S5Q8TDH9 187 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 TMA16Q96EY4 203 aaKnown RBP8.83□□□□□ -1
LINC00558-201ENST00000569422 POMKQ9H5K3 350 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 ZNF212Q9UDV6 495 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 ARHGAP26Q9UNA1 814 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 TCAF1Q9Y4C2 921 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 TMEM238LA0A1B0GVL6 79 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 ZSCAN9O15535 394 aaPredicted RBP8.83□□□□□ -1
LINC00558-201ENST00000569422 SEPT4O43236 478 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 CCDC166P0CW27 439 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 CPB1P15086 417 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 ACADSP16219 412 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 PIK3R1P27986 724 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 GCKP35557 465 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 MAGEA12P43365 314 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 ACBD5Q5T8D3 534 aaPredicted RBP8.83□□□□□ -1
LINC00558-201ENST00000569422 MARC1Q5VT66 337 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 FAM171A1Q5VUB5 890 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 ZYG11AQ6WRX3 759 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 RTN4RL1Q86UN2 441 aaPredicted RBP8.83□□□□□ -1
LINC00558-201ENST00000569422 SUSD3Q96L08 255 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 HAPLN3Q96S86 360 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 CDRT15Q96T59 188 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 ZNF184Q99676 751 aaPredicted RBP8.83□□□□□ -1
LINC00558-201ENST00000569422 C1QTNF1Q9BXJ1 281 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 GPAMQ9HCL2 828 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 DSEQ9UL01 958 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 POMPQ9Y244 141 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 ATP6AP2A0A1C7CYW4 349 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 SLC12A8A0AV02 714 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 ENO4A6NNW6 628 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 M0QZQ0 153 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 TNFRSF10BO14763 440 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 HDAC3O15379 428 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 ATP6AP2O75787 350 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 PAMP19021 973 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 KCNA5P22460 613 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 ARCN1P48444 511 aaKnown RBP8.83□□□□□ -1
LINC00558-201ENST00000569422 MLLT6P55198 1093 aaPredicted RBP8.83□□□□□ -1
LINC00558-201ENST00000569422 PRAMEP78395 509 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 CAP1Q01518 475 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 TRIP10Q15642 601 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 CTXN3Q4LDR2 81 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 BRMS1LQ5PSV4 323 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 ACAD11Q709F0 780 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 PIM3Q86V86 326 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 RTL3Q8N8U3 475 aaKnown RBP8.83□□□□□ -1
LINC00558-201ENST00000569422 KLHDC9Q8NEP7 349 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 SH3RF2Q8TEC5 729 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 IGSF8Q969P0 613 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 FBXO32Q969P5 355 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 HDAC10Q969S8 669 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 RCN3Q96D15 328 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 PKMYT1Q99640 499 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 IL12RB2Q99665 862 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 NPAS2Q99743 824 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 OLFM1Q99784 485 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 SIKE1Q9BRV8 207 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 SMOC2Q9H3U7 446 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 UXTQ9UBK9 157 aaPredicted RBP8.83□□□□□ -1
LINC00558-201ENST00000569422 RAP2CQ9Y3L5 183 aa8.83□□□□□ -1
LINC00558-201ENST00000569422 KCNU1A8MYU2 1149 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 MATN2O00339 956 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 STK25O00506 426 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 KPNA6O60684 536 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 ZNF623O75123 536 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 RAG1P15918 1043 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 HDCP19113 662 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 RAB27AP51159 221 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 ARSDP51689 593 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 FCGRTP55899 365 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 NME5P56597 212 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 GALNT3Q14435 633 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 UGP2Q16851 508 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 GEN1Q17RS7 908 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 GRAMD1BQ3KR37 738 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 RNF220Q5VTB9 566 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 FAM117BQ6P1L5 589 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 LAYNQ6UX15 382 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 RAVER1Q8IY67 606 aaKnown RBP8.82□□□□□ -1
LINC00558-201ENST00000569422 NUP93Q8N1F7 819 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 TMEM151AQ8N4L1 468 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 TXNDC5Q8NBS9 432 aaKnown RBP8.82□□□□□ -1
LINC00558-201ENST00000569422 EXOC2Q96KP1 924 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 SERPINB11Q96P15 392 aa8.82□□□□□ -1
LINC00558-201ENST00000569422 DRC3Q9H069 523 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms