RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 LRRN3Q9H3W5 708 aa15.92■□□□□ 0.14
HERPUD1-215ENST00000568676 MBNL1Q9NR56 388 aaKnown RBP15.92■□□□□ 0.14
HERPUD1-215ENST00000568676 NDFIP2Q9NV92 336 aa15.92■□□□□ 0.14
HERPUD1-215ENST00000568676 APPL1Q9UKG1 709 aa15.92■□□□□ 0.14
HERPUD1-215ENST00000568676 GPR34Q9UPC5 381 aa15.92■□□□□ 0.14
HERPUD1-215ENST00000568676 CHD5Q8TDI0 1954 aa15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 EFSO43281 561 aa15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 BUB1O43683 1085 aa15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 TMCC1O94876 653 aa15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 LRIG2O94898 1065 aa15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 RPLP0P05388 317 aaKnown RBP15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 CD82P27701 267 aa15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 YBEYP58557 167 aaPredicted RBP15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 NFATC3Q12968 1075 aa15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 NFATC4Q14934 902 aa15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 IRF4Q15306 451 aa15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 VWA3BQ502W6 1294 aa15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 JAMLQ86YT9 394 aa15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 ZSCAN1Q8NBB4 408 aa15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 NTAN1Q96AB6 310 aa15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 METTL5Q9NRN9 209 aaKnown RBP15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 STARD5Q9NSY2 213 aa15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 IL17BQ9UHF5 180 aa15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 DGKBQ9Y6T7 804 aa15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 RP1P56715 2156 aa15.91■□□□□ 0.14
HERPUD1-215ENST00000568676 CFAP69A5D8W1 941 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 NOBOXO60393 691 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 PLEKP08567 350 aaPredicted RBP15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 TIMP2P16035 220 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 GLB1P16278 677 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 SRP54P61011 504 aaKnown RBP15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 RHOAP61586 193 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 CCL7P80098 99 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 ALG11Q2TAA5 492 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 ATXN7L2Q5T6C5 722 aaPredicted RBP15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 KLHDC7AQ5VTJ3 777 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 TAF3Q5VWG9 929 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 DPY19L2P1Q6NXN4 242 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 ERAP2Q6P179 960 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 ENPP7Q6UWV6 458 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 ATG14Q6ZNE5 492 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 B3GNT8Q7Z7M8 397 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 ZNF354CQ86Y25 554 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 EXD3Q8N9H8 876 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 GPR156Q8NFN8 814 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 CPA5Q8WXQ8 436 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 CENPIQ92674 756 aaPredicted RBP15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 RBM15Q96T37 977 aaKnown RBP eCLIP15.9■□□□□ 0.148e-7■□□□□ 10.7
HERPUD1-215ENST00000568676 CMKLR1Q99788 373 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 WRAP53Q9BUR4 548 aaKnown RBP15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 APOOQ9BUR5 198 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 NAA15Q9BXJ9 866 aaKnown RBP15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 STK33Q9BYT3 514 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 DONSONQ9NYP3 566 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 SIRPGQ9P1W8 387 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 KLQ9UEF7 1012 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 NEU3Q9UQ49 428 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 PCDHB11Q9Y5F2 797 aa15.9■□□□□ 0.14
HERPUD1-215ENST00000568676 MAST4O15021 2626 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 A0A1W2PQC6 194 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 A0A1W2PQM1 296 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 TSPAN11A1L157 253 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 C2CD4BA6NLJ0 364 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 TNFP01375 233 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 UCHL3P15374 230 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 MMP8P22894 467 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 KELP23276 732 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 C1QBPQ07021 282 aaKnown RBP15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 ZFP36L1Q07352 338 aaKnown RBP15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 MTM1Q13496 603 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 UGP2Q16851 508 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 CDO1Q16878 200 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 WSCD2Q2TBF2 565 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 LINC00303Q3SY05 128 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 PARP15Q460N3 678 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 CCDC14Q49A88 953 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 C2CD6Q53TS8 623 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 MANEAQ5SRI9 462 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 NAA35Q5VZE5 725 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 BRAT1Q6PJG6 821 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 NOP9Q86U38 636 aaKnown RBP15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 DNAAF5Q86Y56 855 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 CCNJLQ8IV13 435 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 EMC1Q8N766 993 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 RTL3Q8N8U3 475 aaKnown RBP15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 EPS8L1Q8TE68 723 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 RXFP2Q8WXD0 754 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 TSACCQ96A04 125 aaPredicted RBP15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 WDR92Q96MX6 357 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 ZNF641Q96N77 438 aaPredicted RBP15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 NCAPGQ9BPX3 1015 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 TUBGCP2Q9BSJ2 902 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 WDR70Q9NW82 654 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 RABGEF1Q9UJ41 708 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 LOXL2Q9Y4K0 774 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 FHOD1Q9Y613 1164 aa15.89■□□□□ 0.13
HERPUD1-215ENST00000568676 F8VZ95 297 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 FAM72CH0Y354 149 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 ZW10O43264 779 aa15.88■□□□□ 0.13
HERPUD1-215ENST00000568676 CELA2BP08218 269 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms