RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 USP45Q70EL2 814 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 ADCK2Q7Z695 626 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 EXOC3L1Q86VI1 746 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 TIFAQ96CG3 184 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 CLPBQ9H078 707 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 ACSS2Q9NR19 701 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 FBXO6Q9NRD1 293 aaPredicted RBP12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 HSFX1Q9UBD0 423 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 DCDC2Q9UHG0 476 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 CCL22O00626 93 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 UGT2B4P06133 528 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 RALBP11234 206 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 IVDP26440 423 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 KIF19Q2TAC6 998 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 STXBP5Q5T5C0 1151 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 TTLL2Q9BWV7 592 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 A0A096LPK6 155 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 LOC100653049A0A140TA62 436 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 A0A1W2PPM1 405 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 NVLO15381 856 aaKnown RBP12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 MAFKO60675 156 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 SMIM24O75264 130 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 KRT34O76011 436 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 MYL2P10916 166 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 CSHL1Q14406 222 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 ZNF284Q2VY69 593 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 PREPLQ4J6C6 727 aaPredicted RBP12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 ERAP2Q6P179 960 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 FBXL19Q6PCT2 694 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 TRMT10BQ6PF06 316 aaKnown RBP12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 RD3Q7Z3Z2 195 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 CHPFQ8IZ52 775 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 ACDQ96AP0 544 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 PPWD1Q96BP3 646 aaKnown RBP12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 TRMT2BQ96GJ1 504 aaKnown RBP12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 TSGA13Q96PP4 275 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 TSSK1BQ9BXA7 367 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 MANSC1Q9H8J5 431 aa12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 TRMT6Q9UJA5 497 aaKnown RBP12.24□□□□□ -0.45
TMEM170A-205ENST00000568559 PHGDHO43175 533 aaKnown RBP12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 PABPC1P11940 636 aaKnown RBP12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 ZNF33AQ06730 810 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 CHI3L2Q15782 390 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 FOXR1Q6PIV2 292 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 BPIFB1Q8TDL5 484 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 TCEAL4Q96EI5 215 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 MYO19Q96H55 970 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 SRPK1Q96SB4 655 aaKnown RBP12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 LZTS1Q9Y250 596 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 VPS26AO75436 327 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 TRIM16O95361 564 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 IL1BP01584 269 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 TYRP14679 529 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 LPOP22079 712 aaPredicted RBP12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 NMBRP28336 390 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 MZF1P28698 734 aaPredicted RBP12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 CCDC15Q0P6D6 951 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 DDX39BQ13838 428 aaKnown RBP12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 STARD3Q14849 445 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 GRAMD4Q6IC98 578 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 ESRP1Q6NXG1 681 aaKnown RBP12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 KLHDC10Q6PID8 442 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 CPA6Q8N4T0 437 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 E2F7Q96AV8 911 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 ABHD8Q96I13 439 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 PKMYT1Q99640 499 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 CATSPERZQ9NTU4 200 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 FBXO5Q9UKT4 447 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 SCAMP1O15126 338 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 PRAMEF11O60813 436 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 F7P08709 466 aaPredicted RBP12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 ECHS1P30084 290 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 NAB1Q13506 487 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 PACS2Q86VP3 889 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 DDIASQ8IXT1 998 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 SH3KBP1Q96B97 665 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 ZNF599Q96NL3 588 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 SFXN1Q9H9B4 322 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 RABGEF1Q9UJ41 708 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 TPP1O14773 563 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 PCDH8O95206 1070 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 NME5P56597 212 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 RFTN1Q14699 578 aaPredicted RBP12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 AGAP9Q5VTM2 703 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 LCA5Q86VQ0 697 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 LRRC34Q8IZ02 419 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 OR4K2Q8NGD2 314 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 ZNF689Q96CS4 500 aaPredicted RBP12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 SLC39A13Q96H72 371 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 SLC22A12Q96S37 553 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 SLC46A2Q9BY10 475 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 ANLNQ9NQW6 1124 aa12.23□□□□□ -0.45
TMEM170A-205ENST00000568559 FAM237BA0A1B0GVD1 139 aa12.22□□□□□ -0.45
TMEM170A-205ENST00000568559 RFXAPO00287 272 aa12.22□□□□□ -0.45
TMEM170A-205ENST00000568559 KDELR3O43731 214 aa12.22□□□□□ -0.45
TMEM170A-205ENST00000568559 WASP42768 502 aa12.22□□□□□ -0.45
TMEM170A-205ENST00000568559 DLG2Q15700 870 aa12.22□□□□□ -0.45
TMEM170A-205ENST00000568559 TAZQ16635 292 aa12.22□□□□□ -0.45
TMEM170A-205ENST00000568559 N4BP2L1Q5TBK1 243 aaPredicted RBP12.22□□□□□ -0.45
TMEM170A-205ENST00000568559 PACS1Q6VY07 963 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms