RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 PPIDQ08752 370 aaKnown RBP13.13□□□□□ -0.31
CNOT1-213ENST00000568158 ZNF211Q13398 564 aaPredicted RBP13.13□□□□□ -0.31
CNOT1-213ENST00000568158 FGL2Q14314 439 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 IHHQ14623 411 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 PDK1Q15118 436 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 UGP2Q16851 508 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 ZNF284Q2VY69 593 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 STPG1Q5TH74 334 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 RABEPKQ7Z6M1 372 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 SYCE1Q8N0S2 351 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 CNTD1Q8N815 330 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 HCAR2Q8TDS4 363 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 RAB7BQ96AH8 199 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 SERAC1Q96JX3 654 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 OLFM3Q96PB7 478 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 MYOCQ99972 504 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 SEMA3CQ99985 751 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 EDEM2Q9BV94 578 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 TSGA10Q9BZW7 698 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 ATP13A3Q9H7F0 1226 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 AASDHPPTQ9NRN7 309 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 KNL1Q8NG31 2342 aa13.13□□□□□ -0.31
CNOT1-213ENST00000568158 GVINP1Q7Z2Y8 2422 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.12□□□□□ -0.31
CNOT1-213ENST00000568158 A0A1W2PR77 199 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 TRAFD1O14545 582 aaPredicted RBP13.12□□□□□ -0.31
CNOT1-213ENST00000568158 AREL1O15033 823 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 TSPAN6O43657 245 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 NEBLO76041 1014 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 HLA-DQB2P05538 268 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 XPAP23025 273 aaPredicted RBP13.12□□□□□ -0.31
CNOT1-213ENST00000568158 SERPINA4P29622 427 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 NR2C2P49116 596 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 AP1S1P61966 158 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 RPS21P63220 83 aaKnown RBP13.12□□□□□ -0.31
CNOT1-213ENST00000568158 RACK1P63244 317 aaKnown RBP13.12□□□□□ -0.31
CNOT1-213ENST00000568158 DSC2Q02487 901 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 NIPAL4Q0D2K0 466 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 TRAF2Q12933 501 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 ZBTB17Q13105 803 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 PPP2R5EQ16537 467 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 TMEM259Q4ZIN3 620 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 PRAMEF14Q5SWL7 426 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 ZC3H18Q86VM9 953 aaKnown RBP13.12□□□□□ -0.31
CNOT1-213ENST00000568158 PAF1Q8N7H5 531 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 PDCD6IPQ8WUM4 868 aaKnown RBP13.12□□□□□ -0.31
CNOT1-213ENST00000568158 P3H4Q92791 437 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 FATE1Q969F0 183 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 RMDN1Q96DB5 314 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 ECHDC3Q96DC8 303 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 IL12RB2Q99665 862 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 SLC17A9Q9BYT1 436 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 CEP41Q9BYV8 373 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 OSBPL8Q9BZF1 889 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 C10orf88Q9H8K7 445 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 FZD3Q9NPG1 666 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 PCDH12Q9NPG4 1184 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 SEPT10Q9P0V9 454 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 ATP8A1Q9Y2Q0 1164 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 TTLL3Q9Y4R7 772 aa13.12□□□□□ -0.31
CNOT1-213ENST00000568158 LAMA1P25391 3075 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 TSPAN11A1L157 253 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 A8MX80 341 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 UPK3BL1B0FP48 263 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 UPK3BL2E5RIL1 263 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 RIOK3O14730 519 aaKnown RBP13.11□□□□□ -0.31
CNOT1-213ENST00000568158 HTRA2O43464 458 aaPredicted RBP13.11□□□□□ -0.31
CNOT1-213ENST00000568158 NRDCO43847 1150 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 SYPP08247 313 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 TGM2P21980 687 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 CD38P28907 300 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 AFF3P51826 1226 aaKnown RBP13.11□□□□□ -0.31
CNOT1-213ENST00000568158 FAM193AP78312 1265 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 GRIK2Q13002 908 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 GSE1Q14687 1217 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 STAT4Q14765 748 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 PTPRRQ15256 657 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 TEAD4Q15561 434 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 KIF19Q2TAC6 998 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 UAP1L1Q3KQV9 507 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 TMEM52BQ4KMG9 183 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 SETMARQ53H47 684 aaPredicted RBP13.11□□□□□ -0.31
CNOT1-213ENST00000568158 CFAP58Q5T655 872 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 BRAT1Q6PJG6 821 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 ZNF662Q6ZS27 426 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 BBS12Q6ZW61 710 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 BZW1Q7L1Q6 419 aaKnown RBP13.11□□□□□ -0.31
CNOT1-213ENST00000568158 ADAT2Q7Z6V5 191 aaKnown RBP13.11□□□□□ -0.31
CNOT1-213ENST00000568158 UBL4BQ8N7F7 174 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 ARRDC2Q8TBH0 407 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 HES6Q96HZ4 224 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 PHF12Q96QT6 1004 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 WRAP53Q9BUR4 548 aaKnown RBP13.11□□□□□ -0.31
CNOT1-213ENST00000568158 C1QTNF2Q9BXJ5 285 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 POLR1EQ9GZS1 481 aaKnown RBP13.11□□□□□ -0.31
CNOT1-213ENST00000568158 KCNF1Q9H3M0 494 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 IL21RQ9HBE5 538 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 TMEM9BQ9NQ34 198 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 DMTF1Q9Y222 760 aa13.11□□□□□ -0.31
CNOT1-213ENST00000568158 ANKRD6Q9Y2G4 727 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms