RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 PIH1D2Q8WWB5 315 aa18.14■□□□□ 0.49
COMMD4-222ENST00000568034 SPACA7Q96KW9 195 aa18.14■□□□□ 0.49
COMMD4-222ENST00000568034 TRIB3Q96RU7 358 aa18.14■□□□□ 0.49
COMMD4-222ENST00000568034 FERMT1Q9BQL6 677 aa18.14■□□□□ 0.49
COMMD4-222ENST00000568034 BTBD1Q9H0C5 482 aa18.14■□□□□ 0.49
COMMD4-222ENST00000568034 SGK2Q9HBY8 427 aa18.14■□□□□ 0.49
COMMD4-222ENST00000568034 DYRK4Q9NR20 520 aa18.14■□□□□ 0.49
COMMD4-222ENST00000568034 UBP1Q9NZI7 540 aa18.14■□□□□ 0.49
COMMD4-222ENST00000568034 NCKAP1Q9Y2A7 1128 aa18.14■□□□□ 0.49
COMMD4-222ENST00000568034 NEU2Q9Y3R4 380 aa18.14■□□□□ 0.49
COMMD4-222ENST00000568034 R4GN57 208 aa18.14■□□□□ 0.49
COMMD4-222ENST00000568034 GOLGA6L10A0A0M3HER8 536 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 UPK3BL1B0FP48 263 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 UPK3BL2E5RIL1 263 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 AREL1O15033 823 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 IFNB1P01574 187 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 PRKCGP05129 697 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 ITIH2P19823 946 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 CNR2P34972 360 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 FNTAP49354 379 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 SFSWAPQ12872 951 aaKnown RBP18.13■□□□□ 0.49
COMMD4-222ENST00000568034 UGP2Q16851 508 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 ATL2Q8NHH9 583 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 ZNF592Q92610 1267 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 DDX47Q9H0S4 455 aaKnown RBP18.13■□□□□ 0.49
COMMD4-222ENST00000568034 FAM153AQ9UHL3 310 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 GGT7Q9UJ14 662 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 CHKBQ9Y259 395 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 ITM2BQ9Y287 266 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 HCN4Q9Y3Q4 1203 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 PCDHB9Q9Y5E1 797 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 FADS3Q9Y5Q0 445 aa18.13■□□□□ 0.49
COMMD4-222ENST00000568034 DMDP11532 3685 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 AP1G1O43747 822 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 SEMA4FO95754 770 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 CPP00450 1065 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 RPL22P35268 128 aaKnown RBP18.12■□□□□ 0.49
COMMD4-222ENST00000568034 PAFAH1B1P43034 410 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 PTPN5P54829 565 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 PARP6Q2NL67 630 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 ARMC12Q5T9G4 340 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 FBXL19Q6PCT2 694 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 CCDC137Q6PK04 289 aaKnown RBP18.12■□□□□ 0.49
COMMD4-222ENST00000568034 ARHGEF18Q6ZSZ5 1173 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 OR14C36Q8NHC7 312 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 PDCD6IPQ8WUM4 868 aaKnown RBP18.12■□□□□ 0.49
COMMD4-222ENST00000568034 RAB7BQ96AH8 199 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 MRGPRX2Q96LB1 330 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 SMIM14Q96QK8 99 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 C6orf106Q9H6K1 298 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-222ENST00000568034 PCDH9Q9HC56 1237 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 PCDH12Q9NPG4 1184 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 VPS45Q9NRW7 570 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 CDC23Q9UJX2 597 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 PPIL1Q9Y3C6 166 aa18.12■□□□□ 0.49
COMMD4-222ENST00000568034 A0A1W2PQ67 120 aa18.11■□□□□ 0.49
COMMD4-222ENST00000568034 PMPCBO75439 489 aa18.11■□□□□ 0.49
COMMD4-222ENST00000568034 URI1O94763 535 aaPredicted RBP18.11■□□□□ 0.49
COMMD4-222ENST00000568034 WNT3AP56704 352 aa18.11■□□□□ 0.49
COMMD4-222ENST00000568034 PPP2CBP62714 309 aa18.11■□□□□ 0.49
COMMD4-222ENST00000568034 PPP2CAP67775 309 aa18.11■□□□□ 0.49
COMMD4-222ENST00000568034 PTPRRQ15256 657 aa18.11■□□□□ 0.49
COMMD4-222ENST00000568034 PLK5Q496M5 336 aa18.11■□□□□ 0.49
COMMD4-222ENST00000568034 CFAP58Q5T655 872 aa18.11■□□□□ 0.49
COMMD4-222ENST00000568034 FAXCQ5TGI0 409 aa18.11■□□□□ 0.49
COMMD4-222ENST00000568034 PMS2CLQ68D20 193 aa18.11■□□□□ 0.49
COMMD4-222ENST00000568034 KCTD11Q693B1 232 aa18.11■□□□□ 0.49
COMMD4-222ENST00000568034 SLC36A4Q6YBV0 504 aa18.11■□□□□ 0.49
COMMD4-222ENST00000568034 ZNF572Q7Z3I7 529 aaPredicted RBP18.11■□□□□ 0.49
COMMD4-222ENST00000568034 TTC7BQ86TV6 843 aa18.11■□□□□ 0.49
COMMD4-222ENST00000568034 MCCC1Q96RQ3 725 aaPredicted RBP18.11■□□□□ 0.49
COMMD4-222ENST00000568034 GPR174Q9BXC1 333 aa18.11■□□□□ 0.49
COMMD4-222ENST00000568034 DUSP15Q9H1R2 295 aaPredicted RBP18.11■□□□□ 0.49
COMMD4-222ENST00000568034 KDM4CQ9H3R0 1056 aa18.11■□□□□ 0.49
COMMD4-222ENST00000568034 PHTF1Q9UMS5 762 aa18.11■□□□□ 0.49
COMMD4-222ENST00000568034 SPAG17Q6Q759 2223 aa18.11■□□□□ 0.49
COMMD4-222ENST00000568034 LOC285095A0A1B0GVY8 99 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 RIOK3O14730 519 aaKnown RBP18.1■□□□□ 0.49
COMMD4-222ENST00000568034 ZNF500O60304 480 aaPredicted RBP18.1■□□□□ 0.49
COMMD4-222ENST00000568034 ATXN1LP0C7T5 689 aaKnown RBP18.1■□□□□ 0.49
COMMD4-222ENST00000568034 ADRA1AP35348 466 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 MMP12P39900 470 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 PTGIRP43119 386 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 GEMP55040 296 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 CDK18Q07002 472 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 RALGDSQ12967 914 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 MPP3Q13368 585 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 GALNT3Q14435 633 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 PCSK7Q16549 785 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 QPCTQ16769 361 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 SLC41A1Q8IVJ1 513 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 TAB3Q8N5C8 712 aaPredicted RBP18.1■□□□□ 0.49
COMMD4-222ENST00000568034 CCDC89Q8N998 374 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 SPATA4Q8NEY3 305 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 LPCAT1Q8NF37 534 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 OR2T34Q8NGX1 318 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 SLCO2A1Q92959 643 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 FEM1CQ96JP0 617 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 ZC3H10Q96K80 434 aaKnown RBP18.1■□□□□ 0.49
COMMD4-222ENST00000568034 EPC1Q9H2F5 836 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms