RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 SPAG7O75391 227 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 PMPCBO75439 489 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 CKMP06732 381 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 HNRNPA1P09651 372 aaKnown RBP eCLIP14.76□□□□□ -0.05
COMMD4-221ENST00000567935 HLA-DPA1P20036 260 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 DRD4P21917 467 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 SPRP35270 261 aaPredicted RBP14.76□□□□□ -0.05
COMMD4-221ENST00000567935 ARHGAP8P85298 464 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 ITKQ08881 620 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 DBN1Q16643 649 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 UGP2Q16851 508 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 STXBP5Q5T5C0 1151 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 SH2D5Q6ZV89 423 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 GAREM2Q75VX8 874 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 C1orf210Q8IVY1 113 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 ARRDC2Q8TBH0 407 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 MGARPQ8TDB4 240 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 PEX13Q92968 403 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 GRAMD1AQ96CP6 724 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 MYEOVQ96EZ4 313 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 FEM1CQ96JP0 617 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 IQCGQ9H095 443 aaKnown RBP14.76□□□□□ -0.05
COMMD4-221ENST00000567935 VPS11Q9H270 941 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 SMPD4Q9NXE4 827 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 DLGAP2Q9P1A6 1054 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 ARHGAP26Q9UNA1 814 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 SH3BP1Q9Y3L3 701 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 MIA3Q5JRA6 1907 aa14.76□□□□□ -0.05
COMMD4-221ENST00000567935 LOC285095A0A1B0GVY8 99 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 COPEO14579 308 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 TIMM44O43615 452 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 GREM1O60565 184 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 XYLBO75191 536 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 LUC7L3O95232 432 aaKnown RBP14.75□□□□□ -0.05
COMMD4-221ENST00000567935 FGF1P05230 155 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 VIMP08670 466 aaKnown RBP14.75□□□□□ -0.05
COMMD4-221ENST00000567935 SERPINF2P08697 491 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 SPATA31D3P0C874 917 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 PTPN2P17706 415 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 RPA3P35244 121 aaPredicted RBP14.75□□□□□ -0.05
COMMD4-221ENST00000567935 CD86P42081 329 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 CCT5P48643 541 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 POLD2P49005 469 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 SERPINH1P50454 418 aaKnown RBP14.75□□□□□ -0.05
COMMD4-221ENST00000567935 CLCN4P51793 760 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 NEK3P51956 506 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 WDR4P57081 412 aaKnown RBP14.75□□□□□ -0.05
COMMD4-221ENST00000567935 LRRC14Q15048 493 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 PDK4Q16654 411 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 MPPE1Q53F39 396 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 ARHGAP15Q53QZ3 475 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 INO80DQ53TQ3 878 aaPredicted RBP14.75□□□□□ -0.05
COMMD4-221ENST00000567935 PPM1JQ5JR12 505 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 RALGPS1Q5JS13 557 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 TXNDC8Q6A555 127 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 KIAA0930Q6ICG6 404 aaPredicted RBP14.75□□□□□ -0.05
COMMD4-221ENST00000567935 SPATA31D4Q6ZUB0 917 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 METTL3Q86U44 580 aaKnown RBP14.75□□□□□ -0.05
COMMD4-221ENST00000567935 KCNMB4Q86W47 210 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 MAML2Q8IZL2 1156 aaPredicted RBP14.75□□□□□ -0.05
COMMD4-221ENST00000567935 ZNF557Q8N988 423 aaPredicted RBP14.75□□□□□ -0.05
COMMD4-221ENST00000567935 ATP2A3Q93084 1043 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 TMA16Q96EY4 203 aaKnown RBP14.75□□□□□ -0.05
COMMD4-221ENST00000567935 SERAC1Q96JX3 654 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 CABS1Q96KC9 395 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 FCRL3Q96P31 734 aaPredicted RBP14.75□□□□□ -0.05
COMMD4-221ENST00000567935 APOL2Q9BQE5 337 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 CINPQ9BW66 212 aaPredicted RBP14.75□□□□□ -0.05
COMMD4-221ENST00000567935 FAM107BQ9H098 131 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 ATXN3LQ9H3M9 355 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 TBC1D17Q9HA65 648 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 KIF9Q9HAQ2 790 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 KCNK12Q9HB15 430 aa14.75□□□□□ -0.05
COMMD4-221ENST00000567935 PIH1D1Q9NWS0 290 aaKnown RBP14.75□□□□□ -0.05
COMMD4-221ENST00000567935 ATXN2Q99700 1313 aaKnown RBP14.74□□□□□ -0.05
COMMD4-221ENST00000567935 E2F8A0AVK6 867 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 FOXO6A8MYZ6 492 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 TBL1XO60907 577 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 CLASP2O75122 1294 aaKnown RBP14.74□□□□□ -0.05
COMMD4-221ENST00000567935 SIN3BO75182 1162 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 RFPL1O75677 317 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 MMP2P08253 660 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 PYGBP11216 843 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 TGM1P22735 817 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 LIMK2P53671 638 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 DSC2Q02487 901 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 OLIG2Q13516 323 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 ATAT1Q5SQI0 421 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 TEDDM1Q5T9Z0 273 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 CXorf57Q6NSI4 855 aaKnown RBP14.74□□□□□ -0.05
COMMD4-221ENST00000567935 CNTN4Q8IWV2 1026 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 TRIM42Q8IWZ5 723 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 LMNTD2Q8IXW0 634 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 CACNA2D3Q8IZS8 1091 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 OR7D4Q8NG98 312 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 CALML6Q8TD86 181 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 TCP10LQ8TDR4 215 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 ISL2Q96A47 359 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 IFT43Q96FT9 208 aa14.74□□□□□ -0.05
COMMD4-221ENST00000567935 SLC22A12Q96S37 553 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms