RNA–Protein interactions for RNA: ENST00000567742.1

AP000439.4-201, humanhuman

TSL 3 BASIC

Gene AP000439.4, Length 664 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.4-201ENST00000567742 ACTL9Q8TC94 416 aa15.29■□□□□ 0.04
AP000439.4-201ENST00000567742 SPOCK2Q92563 424 aa15.29■□□□□ 0.04
AP000439.4-201ENST00000567742 QKIQ96PU8 341 aaKnown RBP eCLIP15.29■□□□□ 0.04
AP000439.4-201ENST00000567742 VAT1Q99536 393 aa15.29■□□□□ 0.04
AP000439.4-201ENST00000567742 HERPUD2Q9BSE4 406 aa15.29■□□□□ 0.04
AP000439.4-201ENST00000567742 NUSAP1Q9BXS6 441 aaKnown RBP15.29■□□□□ 0.04
AP000439.4-201ENST00000567742 MIR1-1HGQ9H1L0 117 aa15.29■□□□□ 0.04
AP000439.4-201ENST00000567742 NOD2Q9HC29 1040 aa15.29■□□□□ 0.04
AP000439.4-201ENST00000567742 TMEM74BQ9NUR3 256 aa15.29■□□□□ 0.04
AP000439.4-201ENST00000567742 CACNA1EQ15878 2313 aa15.29■□□□□ 0.04
AP000439.4-201ENST00000567742 H7C0C1 242 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 NEMP1O14524 444 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 AREL1O15033 823 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 KHNYNO15037 678 aaKnown RBP15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 BCAT2O15382 392 aaPredicted RBP15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 HTRA2O43464 458 aaPredicted RBP15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 GJB3O75712 270 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 SERPINF2P08697 491 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 TIMP2P16035 220 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 TGM1P22735 817 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 ATP5OP48047 213 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 PPP2CBP62714 309 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 RPS21P63220 83 aaKnown RBP15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 PPP2CAP67775 309 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 SLC45A4Q5BKX6 768 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 TRIM61Q5EBN2 209 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 ERAP2Q6P179 960 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 PRR23CQ6ZRP0 262 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 HORMAD1Q86X24 394 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 CDKL3Q8IVW4 592 aaPredicted RBP15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 ZCCHC9Q8N567 271 aaKnown RBP15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 C12orf50Q8NA57 414 aaPredicted RBP15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 HTR3CQ8WXA8 447 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 TRMT1Q9NXH9 659 aaKnown RBP15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 DMTF1Q9Y222 760 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 JRKLQ9Y4A0 524 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 PCDHGC4Q9Y5F7 938 aa15.28■□□□□ 0.04
AP000439.4-201ENST00000567742 A0A1W2PQU0 124 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 TTC24A2A3L6 582 aaPredicted RBP15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 KCNK3O14649 394 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 KIF5CO60282 957 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 CPP00450 1065 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 RBP3P10745 1247 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 PTPN3P26045 913 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 HOXD11P31277 338 aaPredicted RBP15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 EIF3EP60228 445 aaKnown RBP15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 RACK1P63244 317 aaKnown RBP15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 DSC2Q02487 901 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 KLF1Q13351 362 aaPredicted RBP15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 TEAD4Q15561 434 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 CCDC6Q16204 474 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 ARMC12Q5T9G4 340 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 NDUFAF2Q8N183 169 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 ARRDC2Q8TBH0 407 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 CXorf40AQ8TE69 158 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 PDCD6IPQ8WUM4 868 aaKnown RBP15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 TEKT5Q96M29 485 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 NSMCE3Q96MG7 304 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 AGAP3Q96P47 875 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 ORAI3Q9BRQ5 295 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 TLR10Q9BXR5 811 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 PARD6AQ9NPB6 346 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 PHTF1Q9UMS5 762 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 SLC6A14Q9UN76 642 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 RAI2Q9Y5P3 530 aa15.27■□□□□ 0.04
AP000439.4-201ENST00000567742 RIOK3O14730 519 aaKnown RBP15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 CFIP05156 583 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 SYPP08247 313 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 MAT2AP31153 395 aaKnown RBP15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 GRIA4P48058 902 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 AFF3P51826 1226 aaKnown RBP15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 TRAF2Q12933 501 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 SLC14A2Q15849 920 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 TMEM52BQ4KMG9 183 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 TMEM259Q4ZIN3 620 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 NAPEPLDQ6IQ20 393 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 B4GALNT4Q76KP1 1039 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 ZSWIM9Q86XI8 627 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 CNTD1Q8N815 330 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 C1orf216Q8TAB5 229 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 MAIP1Q8WWC4 291 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 SKA1Q96BD8 255 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 CEP41Q9BYV8 373 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 FRMD8P1Q9BZ68 369 aaPredicted RBP15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 SLC25A51Q9H1U9 297 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 SMOC1Q9H4F8 434 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 EBF2Q9HAK2 575 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 TM9SF3Q9HD45 589 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 PCDH12Q9NPG4 1184 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 ZFR2Q9UPR6 939 aaKnown RBP15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 PCDHB9Q9Y5E1 797 aa15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 ZFHX2Q9C0A1 2572 aaPredicted RBP15.26■□□□□ 0.03
AP000439.4-201ENST00000567742 GPR179Q6PRD1 2367 aa15.25■□□□□ 0.03
AP000439.4-201ENST00000567742 CFAP69A5D8W1 941 aa15.25■□□□□ 0.03
AP000439.4-201ENST00000567742 PATE3B3GLJ2 98 aa15.25■□□□□ 0.03
AP000439.4-201ENST00000567742 PRAMEF26H0Y7S4 382 aa15.25■□□□□ 0.03
AP000439.4-201ENST00000567742 SPINT1O43278 529 aa15.25■□□□□ 0.03
AP000439.4-201ENST00000567742 TM7SF2O76062 418 aa15.25■□□□□ 0.03
AP000439.4-201ENST00000567742 STK10O94804 968 aaKnown RBP15.25■□□□□ 0.03
AP000439.4-201ENST00000567742 PGLSO95336 258 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms