RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 KLHL30Q0D2K2 578 aa18.5■□□□□ 0.55
USB1-213ENST00000566292 CDCP2Q5VXM1 449 aa18.5■□□□□ 0.55
USB1-213ENST00000566292 ARHGAP36Q6ZRI8 547 aa18.5■□□□□ 0.55
USB1-213ENST00000566292 HCAR2Q8TDS4 363 aa18.5■□□□□ 0.55
USB1-213ENST00000566292 LMX1AQ8TE12 382 aa18.5■□□□□ 0.55
USB1-213ENST00000566292 CRELD1Q96HD1 420 aa18.5■□□□□ 0.55
USB1-213ENST00000566292 DCBLD2Q96PD2 775 aa18.5■□□□□ 0.55
USB1-213ENST00000566292 USP29Q9HBJ7 922 aa18.5■□□□□ 0.55
USB1-213ENST00000566292 DONSONQ9NYP3 566 aa18.5■□□□□ 0.55
USB1-213ENST00000566292 PCDHB1Q9Y5F3 818 aa18.5■□□□□ 0.55
USB1-213ENST00000566292 LOC400499M0QZD8 3231 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 LRCH4O75427 683 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 GCATO75600 419 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 RNF8O76064 485 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 GP1BAP07359 652 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 XPAP23025 273 aaPredicted RBP18.49■□□□□ 0.55
USB1-213ENST00000566292 DUSP3P51452 185 aaPredicted RBP18.49■□□□□ 0.55
USB1-213ENST00000566292 SUOXP51687 545 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 THOP1P52888 689 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 YPEL5P62699 121 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 ELP6Q0PNE2 266 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 GRM3Q14832 879 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 NR1I3Q14994 352 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 IRF4Q15306 451 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 UGP2Q16851 508 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 DEFB133Q30KQ1 61 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 ZCCHC8Q6NZY4 707 aaKnown RBP18.49■□□□□ 0.55
USB1-213ENST00000566292 ZSWIM9Q86XI8 627 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 CAMK1DQ8IU85 385 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 PHACTR4Q8IZ21 702 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 NPWQ8N729 165 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 TSEN2Q8NCE0 465 aaKnown RBP18.49■□□□□ 0.55
USB1-213ENST00000566292 IFI44Q8TCB0 444 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 ZNF653Q96CK0 615 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 C1QTNF7Q9BXJ2 289 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 PCDH12Q9NPG4 1184 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 APOBEC3BQ9UH17 382 aaKnown RBP18.49■□□□□ 0.55
USB1-213ENST00000566292 SHROOM3Q8TF72 1996 aa18.49■□□□□ 0.55
USB1-213ENST00000566292 RIOK3O14730 519 aaKnown RBP18.48■□□□□ 0.55
USB1-213ENST00000566292 DAPK3O43293 454 aa18.48■□□□□ 0.55
USB1-213ENST00000566292 PRPSAP2O60256 369 aa18.48■□□□□ 0.55
USB1-213ENST00000566292 BRINP1O60477 761 aa18.48■□□□□ 0.55
USB1-213ENST00000566292 C6P13671 934 aa18.48■□□□□ 0.55
USB1-213ENST00000566292 EIF4A3P38919 411 aaKnown RBP18.48■□□□□ 0.55
USB1-213ENST00000566292 EIF2S3P41091 472 aaKnown RBP18.48■□□□□ 0.55
USB1-213ENST00000566292 C1orf61Q13536 156 aa18.48■□□□□ 0.55
USB1-213ENST00000566292 PTK2BQ14289 1009 aa18.48■□□□□ 0.55
USB1-213ENST00000566292 WSCD2Q2TBF2 565 aa18.48■□□□□ 0.55
USB1-213ENST00000566292 PPP6R3Q5H9R7 873 aaPredicted RBP18.48■□□□□ 0.55
USB1-213ENST00000566292 MACC1Q6ZN28 852 aa18.48■□□□□ 0.55
USB1-213ENST00000566292 SRLQ86TD4 932 aa18.48■□□□□ 0.55
USB1-213ENST00000566292 PSTKQ8IV42 348 aaKnown RBP18.48■□□□□ 0.55
USB1-213ENST00000566292 TP53INP2Q8IXH6 220 aa18.48■□□□□ 0.55
USB1-213ENST00000566292 BTN2A2Q8WVV5 523 aa18.48■□□□□ 0.55
USB1-213ENST00000566292 ZNF641Q96N77 438 aaPredicted RBP18.48■□□□□ 0.55
USB1-213ENST00000566292 LRRC61Q9BV99 259 aa18.48■□□□□ 0.55
USB1-213ENST00000566292 EDEM3Q9BZQ6 932 aa18.48■□□□□ 0.55
USB1-213ENST00000566292 ISCUQ9H1K1 167 aa18.48■□□□□ 0.55
USB1-213ENST00000566292 CWC15Q9P013 229 aaKnown RBP18.48■□□□□ 0.55
USB1-213ENST00000566292 MYO1AQ9UBC5 1043 aa18.48■□□□□ 0.55
USB1-213ENST00000566292 SPASTQ9UBP0 616 aa18.48■□□□□ 0.55
USB1-213ENST00000566292 SALL4Q9UJQ4 1053 aa18.48■□□□□ 0.55
USB1-213ENST00000566292 PTPRQQ9UMZ3 2332 aa18.48■□□□□ 0.55
USB1-213ENST00000566292 DFFAO00273 331 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 TOR1BO14657 336 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 TPP1O14773 563 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 PALMO75781 387 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 PRKCGP05129 697 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 IL1R2P27930 398 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 ITPKBP27987 946 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 MMP12P39900 470 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 CSNK1DP48730 415 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 HCAR3P49019 387 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 DPYSQ14117 519 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 CDKN3Q16667 212 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 PRRT3Q5FWE3 981 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 GUSBP11Q6P575 273 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 BRAT1Q6PJG6 821 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 NSMCE3Q96MG7 304 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 TUBGCP5Q96RT8 1024 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 IL12RB2Q99665 862 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 BOCQ9BWV1 1114 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 CLPBQ9H078 707 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 SP110Q9HB58 689 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 EVA1BQ9NVM1 165 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 SCINQ9Y6U3 715 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 KIF26BQ2KJY2 2108 aa18.47■□□□□ 0.55
USB1-213ENST00000566292 SMG1Q96Q15 3661 aaKnown RBP18.46■□□□□ 0.55
USB1-213ENST00000566292 CPED1A4D0V7 1026 aa18.46■□□□□ 0.55
USB1-213ENST00000566292 MUSKO15146 869 aa18.46■□□□□ 0.55
USB1-213ENST00000566292 SERPINC1P01008 464 aa18.46■□□□□ 0.55
USB1-213ENST00000566292 TCF4P15884 667 aa18.46■□□□□ 0.55
USB1-213ENST00000566292 TGM2P21980 687 aa18.46■□□□□ 0.55
USB1-213ENST00000566292 ABCG1P45844 678 aa18.46■□□□□ 0.55
USB1-213ENST00000566292 LIG3P49916 1009 aa18.46■□□□□ 0.55
USB1-213ENST00000566292 ADKP55263 362 aaKnown RBP18.46■□□□□ 0.55
USB1-213ENST00000566292 IL10RBQ08334 325 aa18.46■□□□□ 0.55
USB1-213ENST00000566292 LRRC14Q15048 493 aa18.46■□□□□ 0.55
USB1-213ENST00000566292 SOWAHCQ53LP3 525 aaPredicted RBP18.46■□□□□ 0.55
USB1-213ENST00000566292 FIGNQ5HY92 759 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms