RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 NDUFS1P28331 727 aa4.46□□□□□ -1.69
LINC00561-201ENST00000565815 NR1H2P55055 460 aa4.46□□□□□ -1.69
LINC00561-201ENST00000565815 NHLH1Q02575 133 aa4.46□□□□□ -1.69
LINC00561-201ENST00000565815 SLC20A2Q08357 652 aa4.46□□□□□ -1.69
LINC00561-201ENST00000565815 CLCA4Q14CN2 919 aa4.46□□□□□ -1.69
LINC00561-201ENST00000565815 LEXMQ3ZCV2 418 aa4.46□□□□□ -1.69
LINC00561-201ENST00000565815 JAKMIP3Q5VZ66 844 aa4.46□□□□□ -1.69
LINC00561-201ENST00000565815 USP51Q70EK9 711 aa4.46□□□□□ -1.69
LINC00561-201ENST00000565815 GALNT4Q8N4A0 578 aa4.46□□□□□ -1.69
LINC00561-201ENST00000565815 PAF1Q8N7H5 531 aa4.46□□□□□ -1.69
LINC00561-201ENST00000565815 FAM71DQ8N9W8 422 aa4.46□□□□□ -1.69
LINC00561-201ENST00000565815 ENGASEQ8NFI3 743 aa4.46□□□□□ -1.69
LINC00561-201ENST00000565815 SPPL3Q8TCT6 385 aa4.46□□□□□ -1.69
LINC00561-201ENST00000565815 MRPS27Q92552 414 aaKnown RBP4.46□□□□□ -1.69
LINC00561-201ENST00000565815 TWNKQ96RR1 684 aa4.46□□□□□ -1.69
LINC00561-201ENST00000565815 THAP7Q9BT49 309 aaPredicted RBP4.46□□□□□ -1.69
LINC00561-201ENST00000565815 EPHX3Q9H6B9 360 aa4.46□□□□□ -1.69
LINC00561-201ENST00000565815 SH2D4AQ9H788 454 aa4.46□□□□□ -1.69
LINC00561-201ENST00000565815 V9GYY5 206 aaPredicted RBP4.46□□□□□ -1.69
LINC00561-201ENST00000565815 LRRC37A2A6NM11 1700 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 DOCK3Q8IZD9 2030 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 CCDC69A6NI79 296 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 RRHO14718 337 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 RHOBTB3O94955 611 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 NXPH3O95157 252 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 ZFYP08048 801 aaPredicted RBP4.46□□□□□ -1.7
LINC00561-201ENST00000565815 HNRNPA1P09651 372 aaKnown RBP eCLIP4.46□□□□□ -1.7
LINC00561-201ENST00000565815 ITGB8P26012 769 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 BTDP43251 543 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 CDK7P50613 346 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 CCZ1BP86790 482 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 CCZ1P86791 482 aaPredicted RBP4.46□□□□□ -1.7
LINC00561-201ENST00000565815 CCDC15Q0P6D6 951 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 CCL14Q16627 93 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 FAM187BQ17R55 369 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 TEX35Q5T0J7 233 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 SLC9C2Q5TAH2 1124 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 ACSM6Q6P461 480 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 OLFML1Q6UWY5 402 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 VPS52Q8N1B4 723 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 NECAB1Q8N987 351 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 VPS50Q96JG6 964 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 C16orf45Q96MC5 204 aaPredicted RBP4.46□□□□□ -1.7
LINC00561-201ENST00000565815 GLT1D1Q96MS3 346 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 SNX18Q96RF0 628 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 NUDT22Q9BRQ3 303 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 CTDSP1Q9GZU7 261 aa4.46□□□□□ -1.7
LINC00561-201ENST00000565815 UPF3AQ9H1J1 476 aaKnown RBP4.46□□□□□ -1.7
LINC00561-201ENST00000565815 LIN7CQ9NUP9 197 aaKnown RBP4.46□□□□□ -1.7
LINC00561-201ENST00000565815 A0A0D9SFI3 127 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 DDTLA6NHG4 134 aaPredicted RBP4.45□□□□□ -1.7
LINC00561-201ENST00000565815 SNAP23O00161 211 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 ZSCAN12O43309 604 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 TUBBP07437 444 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 SUPT20HL2P0C7V6 817 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 H2AFXP16104 143 aaPredicted RBP4.45□□□□□ -1.7
LINC00561-201ENST00000565815 U2AF2P26368 475 aaKnown RBP eCLIP4.45□□□□□ -1.7
LINC00561-201ENST00000565815 IDUAP35475 653 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 IL15P40933 162 aaPredicted RBP4.45□□□□□ -1.7
LINC00561-201ENST00000565815 CCT5P48643 541 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 JAK3P52333 1124 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 SLC37A1P57057 533 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 SIM2Q14190 667 aaPredicted RBP4.45□□□□□ -1.7
LINC00561-201ENST00000565815 ST3GAL2Q16842 350 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 SH2D4BQ5SQS7 431 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 ZNF771Q7L3S4 317 aaPredicted RBP4.45□□□□□ -1.7
LINC00561-201ENST00000565815 PNPLA1Q8N8W4 532 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 TERB1Q8NA31 727 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 KBTBD3Q8NAB2 608 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 KLHDC9Q8NEP7 349 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 ABHD11Q8NFV4 315 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 OR6Y1Q8NGX8 325 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 WDR60Q8WVS4 1066 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 CPT1BQ92523 772 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 ZBTB10Q96DT7 871 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 TWSG1Q9GZX9 223 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 HOOK1Q9UJC3 728 aaKnown RBP4.45□□□□□ -1.7
LINC00561-201ENST00000565815 MYH2Q9UKX2 1941 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 FAM237AA0A1B0GTK4 181 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 DCXO43602 365 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 DUSP11O75319 330 aaKnown RBP4.45□□□□□ -1.7
LINC00561-201ENST00000565815 CNMDO75829 334 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 C1QL1O75973 258 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 CD4P01730 458 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 UQCRFS1P1P0C7P4 283 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 TACR2P21452 398 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 SFPQP23246 707 aaKnown RBP eCLIP4.45□□□□□ -1.7
LINC00561-201ENST00000565815 PROK1P58294 105 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 COG2Q14746 738 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 CAMK4Q16566 473 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 CHSY1Q86X52 802 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 DHX40Q8IX18 779 aaKnown RBP4.45□□□□□ -1.7
LINC00561-201ENST00000565815 C17orf53Q8N3J3 647 aaPredicted RBP4.45□□□□□ -1.7
LINC00561-201ENST00000565815 LINC01465Q8N7H1 131 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 RP9Q8TA86 221 aaKnown RBP4.45□□□□□ -1.7
LINC00561-201ENST00000565815 ARRDC3Q96B67 414 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 HS6ST2Q96MM7 605 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 BBC3Q96PG8 261 aaPredicted RBP4.45□□□□□ -1.7
LINC00561-201ENST00000565815 PAAF1Q9BRP4 392 aa4.45□□□□□ -1.7
LINC00561-201ENST00000565815 BICC1Q9H694 974 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms