RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 HOXD12P35452 270 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 DPP6P42658 865 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 YWHAGP61981 247 aaKnown RBP eCLIP6.33□□□□□ -1.4
UBFD1-204ENST00000565634 SQSTM1Q13501 440 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 EIF4EBP2Q13542 120 aaPredicted RBP6.33□□□□□ -1.4
UBFD1-204ENST00000565634 VEPH1Q14D04 833 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 STILQ15468 1287 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 SPDYCQ5MJ68 293 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 SYCP2LQ5T4T6 812 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 PLEKHA7Q6IQ23 1121 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 PAOXQ6QHF9 649 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 CYP4V2Q6ZWL3 525 aaPredicted RBP6.33□□□□□ -1.4
UBFD1-204ENST00000565634 CBLL1Q75N03 491 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 ANKS1BQ7Z6G8 1248 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 FAM124AQ86V42 546 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 MON1AQ86VX9 555 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 ADGRG2Q8IZP9 1017 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 GIMAP7Q8NHV1 300 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 SLC35G2Q8TBE7 412 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 SNX19Q92543 992 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 ATP2A3Q93084 1043 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 IQCDQ96DY2 449 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 TRMT2BQ96GJ1 504 aaKnown RBP6.33□□□□□ -1.4
UBFD1-204ENST00000565634 CFAP57Q96MR6 1250 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 PEBP4Q96S96 227 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 TBCBQ99426 244 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 EIF3CQ99613 913 aaKnown RBP6.33□□□□□ -1.4
UBFD1-204ENST00000565634 TNKS2Q9H2K2 1166 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 ARHGEF4Q9NR80 690 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 ZNHIT6Q9NWK9 470 aaKnown RBP6.33□□□□□ -1.4
UBFD1-204ENST00000565634 SMPD4Q9NXE4 827 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 TRMT1Q9NXH9 659 aaKnown RBP6.33□□□□□ -1.4
UBFD1-204ENST00000565634 COX16Q9P0S2 106 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 CNOT8Q9UFF9 292 aaKnown RBP6.33□□□□□ -1.4
UBFD1-204ENST00000565634 MAFFQ9ULX9 164 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 DAAM1Q9Y4D1 1078 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 ASB3Q9Y575 518 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 PCDHB1Q9Y5F3 818 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 BZW2Q9Y6E2 419 aaKnown RBP6.33□□□□□ -1.4
UBFD1-204ENST00000565634 LRRK1Q38SD2 2015 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 LRRK2Q5S007 2527 aa6.33□□□□□ -1.4
UBFD1-204ENST00000565634 A0A1W2PQF6 199 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 C2CD4BA6NLJ0 364 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 TMEM110-MUSTN1A8MSY1 372 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 FANCGO15287 622 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 BCAT2O15382 392 aaPredicted RBP6.32□□□□□ -1.4
UBFD1-204ENST00000565634 FLRT2O43155 660 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 RTN3O95197 1032 aaPredicted RBP6.32□□□□□ -1.4
UBFD1-204ENST00000565634 CER1O95813 267 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 OAS1P00973 400 aaKnown RBP6.32□□□□□ -1.4
UBFD1-204ENST00000565634 CYP17A1P05093 508 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 PTMAP06454 111 aaKnown RBP6.32□□□□□ -1.4
UBFD1-204ENST00000565634 CKMP06732 381 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 CTSBP07858 339 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 TPM1P09493 284 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 H2AFZP0C0S5 128 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 IRF1P10914 325 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 NCAM1P13591 858 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 PDGFRAP16234 1089 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 HDCP19113 662 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 IL1R2P27930 398 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 ACTN2P35609 894 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 ACADSBP45954 432 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 NSFP46459 744 aaKnown RBP6.32□□□□□ -1.4
UBFD1-204ENST00000565634 TMPRSS3P57727 454 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 GSDMDP57764 484 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 YWHAZP63104 245 aaKnown RBP6.32□□□□□ -1.4
UBFD1-204ENST00000565634 EFEMP1Q12805 493 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 RTP5Q14D33 572 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 DHCR24Q15392 516 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 KCTD19Q17RG1 926 aaPredicted RBP6.32□□□□□ -1.4
UBFD1-204ENST00000565634 TBC1D25Q3MII6 688 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 LINC00303Q3SY05 128 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 DCAF6Q58WW2 860 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 ZC3H12AQ5D1E8 599 aaKnown RBP6.32□□□□□ -1.4
UBFD1-204ENST00000565634 C10orf120Q5SQS8 335 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 FAM102AQ5T9C2 384 aaPredicted RBP6.32□□□□□ -1.4
UBFD1-204ENST00000565634 SNX30Q5VWJ9 437 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 FBXW10Q5XX13 1052 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 RHBDF2Q6PJF5 856 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 ATG14Q6ZNE5 492 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 H2AFVQ71UI9 128 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 BNIPLQ7Z465 357 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 RABEPKQ7Z6M1 372 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 ZAR1Q86SH2 424 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 C14orf80Q86SX3 495 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 TAC4Q86UU9 113 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 PTRH1Q86Y79 214 aaKnown RBP6.32□□□□□ -1.4
UBFD1-204ENST00000565634 SIX6OS1Q8N1H7 587 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 PYROXD2Q8N2H3 581 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 NETO2Q8NC67 525 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 DQX1Q8TE96 717 aaKnown RBP6.32□□□□□ -1.4
UBFD1-204ENST00000565634 IPO4Q8TEX9 1081 aaKnown RBP6.32□□□□□ -1.4
UBFD1-204ENST00000565634 MRPS31Q92665 395 aaKnown RBP6.32□□□□□ -1.4
UBFD1-204ENST00000565634 NT5C3BQ969T7 300 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 EXOC4Q96A65 974 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 FAM149B1Q96BN6 582 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 ZNF653Q96CK0 615 aa6.32□□□□□ -1.4
UBFD1-204ENST00000565634 TOE1Q96GM8 510 aaKnown RBP6.32□□□□□ -1.4
UBFD1-204ENST00000565634 MCEEQ96PE7 176 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms