RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 KLHL30Q0D2K2 578 aa15.15■□□□□ 0.02
SPG7-210ENST00000564409 LRRC14Q15048 493 aa15.15■□□□□ 0.02
SPG7-210ENST00000564409 ZNF542PQ5EBM4 170 aa15.15■□□□□ 0.02
SPG7-210ENST00000564409 AFMIDQ63HM1 303 aa15.15■□□□□ 0.02
SPG7-210ENST00000564409 LRRC69Q6ZNQ3 347 aa15.15■□□□□ 0.02
SPG7-210ENST00000564409 RFX8Q6ZV50 586 aa15.15■□□□□ 0.02
SPG7-210ENST00000564409 VPS36Q86VN1 386 aa15.15■□□□□ 0.02
SPG7-210ENST00000564409 LSMEM2Q8N112 164 aa15.15■□□□□ 0.02
SPG7-210ENST00000564409 ATL2Q8NHH9 583 aa15.15■□□□□ 0.02
SPG7-210ENST00000564409 FGF11Q92914 225 aa15.15■□□□□ 0.02
SPG7-210ENST00000564409 IQCDQ96DY2 449 aa15.15■□□□□ 0.02
SPG7-210ENST00000564409 SNRNP25Q9BV90 132 aaKnown RBP15.15■□□□□ 0.02
SPG7-210ENST00000564409 ATP13A3Q9H7F0 1226 aa15.15■□□□□ 0.02
SPG7-210ENST00000564409 BZW2Q9Y6E2 419 aaKnown RBP15.15■□□□□ 0.02
SPG7-210ENST00000564409 RP1P56715 2156 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 LY6G6EA0A0G2JKS1 128 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 LMO7DNF2Z398 122 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 PALMO75781 387 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 NEBLO76041 1014 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 SERPINA4P29622 427 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 MIPP30301 263 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 PCK1P35558 622 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 EIF4A3P38919 411 aaKnown RBP15.14■□□□□ 0.01
SPG7-210ENST00000564409 EIF2S3P41091 472 aaKnown RBP15.14■□□□□ 0.01
SPG7-210ENST00000564409 ABCG1P45844 678 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 PAPOLAP51003 745 aaKnown RBP15.14■□□□□ 0.01
SPG7-210ENST00000564409 RENBPP51606 427 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 CLDN6P56747 220 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 POLR2LP62875 67 aaKnown RBP15.14■□□□□ 0.01
SPG7-210ENST00000564409 IL10RBQ08334 325 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 EIF2B5Q13144 721 aaKnown RBP15.14■□□□□ 0.01
SPG7-210ENST00000564409 KLHL40Q2TBA0 621 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 BOLA3Q53S33 107 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 LVRNQ6Q4G3 990 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 ZNF571Q7Z3V5 609 aaPredicted RBP15.14■□□□□ 0.01
SPG7-210ENST00000564409 SRLQ86TD4 932 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 PHACTR4Q8IZ21 702 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 FSTL5Q8N475 847 aaPredicted RBP15.14■□□□□ 0.01
SPG7-210ENST00000564409 ARFGAP1Q8N6T3 406 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 TP53I13Q8NBR0 393 aaPredicted RBP15.14■□□□□ 0.01
SPG7-210ENST00000564409 WDR48Q8TAF3 677 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 LMX1AQ8TE12 382 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 NAT6Q93015 286 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 ZNF599Q96NL3 588 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 BOCQ9BWV1 1114 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 SLC39A8Q9C0K1 460 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 ISCUQ9H1K1 167 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 ZWILCHQ9H900 591 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 CNOT8Q9UFF9 292 aaKnown RBP15.14■□□□□ 0.01
SPG7-210ENST00000564409 APOBEC3BQ9UH17 382 aaKnown RBP15.14■□□□□ 0.01
SPG7-210ENST00000564409 PCSK1NQ9UHG2 260 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 KLF15Q9UIH9 416 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 U3KQA8 63 aa15.14■□□□□ 0.01
SPG7-210ENST00000564409 A0A1W2PQ67 120 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 EME2A4GXA9 379 aaPredicted RBP15.13■□□□□ 0.01
SPG7-210ENST00000564409 J3KR12 359 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 INSIG1O15503 277 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 DXOO77932 396 aaKnown RBP15.13■□□□□ 0.01
SPG7-210ENST00000564409 SERPINC1P01008 464 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 ANXA6P08133 673 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 ERCC2P18074 760 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 HTR1BP28222 390 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 MMP12P39900 470 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 ATRXP46100 2492 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 TPM4P67936 248 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 PPARDQ03181 441 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 NR1I3Q14994 352 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 ELOCQ15369 112 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 NR0B2Q15466 257 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 PRRT3Q5FWE3 981 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 PPP6R3Q5H9R7 873 aaPredicted RBP15.13■□□□□ 0.01
SPG7-210ENST00000564409 FAXCQ5TGI0 409 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 KDM7AQ6ZMT4 941 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 IFI44Q8TCB0 444 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 MAPK15Q8TD08 544 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 SCG3Q8WXD2 468 aaKnown RBP15.13■□□□□ 0.01
SPG7-210ENST00000564409 SPOCK2Q92563 424 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 SYN2Q92777 582 aaPredicted RBP15.13■□□□□ 0.01
SPG7-210ENST00000564409 ZNF653Q96CK0 615 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 EXOC2Q96KP1 924 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 ZNF578Q96N58 590 aaPredicted RBP15.13■□□□□ 0.01
SPG7-210ENST00000564409 WRAP53Q9BUR4 548 aaKnown RBP15.13■□□□□ 0.01
SPG7-210ENST00000564409 SP110Q9HB58 689 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 PCDH12Q9NPG4 1184 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 GPATCH2LQ9NWQ4 482 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 ATP8A1Q9Y2Q0 1164 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 SHROOM3Q8TF72 1996 aa15.13■□□□□ 0.01
SPG7-210ENST00000564409 A0A1W2PQJ5 194 aa15.12■□□□□ 0.01
SPG7-210ENST00000564409 H3BRJ5 948 aa15.12■□□□□ 0.01
SPG7-210ENST00000564409 DDX3XO00571 662 aaKnown RBP eCLIP15.12■□□□□ 0.01
SPG7-210ENST00000564409 ATMINO43313 823 aaPredicted RBP15.12■□□□□ 0.01
SPG7-210ENST00000564409 BRINP1O60477 761 aa15.12■□□□□ 0.01
SPG7-210ENST00000564409 LRCH4O75427 683 aa15.12■□□□□ 0.01
SPG7-210ENST00000564409 TCEA3O75764 348 aa15.12■□□□□ 0.01
SPG7-210ENST00000564409 PIGNO95427 931 aa15.12■□□□□ 0.01
SPG7-210ENST00000564409 ALPIP09923 528 aa15.12■□□□□ 0.01
SPG7-210ENST00000564409 NFKBIAP25963 317 aa15.12■□□□□ 0.01
SPG7-210ENST00000564409 HSPA9P38646 679 aaKnown RBP15.12■□□□□ 0.01
SPG7-210ENST00000564409 ARL4AP40617 200 aa15.12■□□□□ 0.01
SPG7-210ENST00000564409 LSSP48449 732 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms