RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 SSH1Q8WYL5 1049 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 APBB2Q92870 758 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 XAGE2Q96GT9 111 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 ZNF560Q96MR9 790 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 DGAT2Q96PD7 388 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 TRERF1Q96PN7 1200 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 NR1H4Q96RI1 486 aaPredicted RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 PTPN18Q99952 460 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 RTKNQ9BST9 563 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 TUFT1Q9NNX1 390 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 DCDC2Q9UHG0 476 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 PMF1-BGLAPU3KQ54 211 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 PLEKHG2Q9H7P9 1386 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 PLEKHH1Q9ULM0 1364 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 A0A1B0GUL7 405 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 GLOD5A6NK44 160 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 GPR171O14626 319 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 MEIS2O14770 477 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 IL1R1P14778 569 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 CYP2B6P20813 491 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 IL32P24001 234 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 LCN1P31025 176 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 CAPGP40121 348 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 RNF4P78317 190 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 TGM3Q08188 693 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 RRS1Q15050 365 aaKnown RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 HIKESHIQ53FT3 197 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 ZNF697Q5TEC3 545 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 VWA5B1Q5TIE3 1220 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 AFMIDQ63HM1 303 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 CEP85Q6P2H3 762 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 ZNF573Q86YE8 665 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 GPR65Q8IYL9 337 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 RBM15BQ8NDT2 890 aaKnown RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 DBF4BQ8NFT6 615 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 TTLQ8NG68 377 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 OR6Y1Q8NGX8 325 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 OR2T3Q8NH03 318 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 RHPN1Q8TCX5 695 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 PRPF31Q8WWY3 499 aaKnown RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 OR1E3Q8WZA6 343 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 ISG20Q96AZ6 181 aaKnown RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 ANKRD27Q96NW4 1050 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 NECTIN4Q96NY8 510 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 FRMD8Q9BZ67 464 aaPredicted RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 DCLK3Q9C098 648 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 FHDC1Q9C0D6 1143 aaPredicted RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 FAM192AQ9GZU8 254 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 SLC32A1Q9H598 525 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 EXO5Q9H790 373 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 STK17AQ9UEE5 414 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 SLCO3A1Q9UIG8 710 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 ANAPC2Q9UJX6 822 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 GPR55Q9Y2T6 319 aaPredicted RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 KCNE2Q9Y6J6 123 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 PRDM15P57071 1507 aaPredicted RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 TNRQ92752 1358 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 A0A1W2PQ67 120 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 E9PMD0 336 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 FPGTO14772 594 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 PCDH17O14917 1159 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 ZNF185O15231 689 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 NTRK1P04629 796 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 ANXA2P07355 339 aaKnown RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 IGFBP1P08833 259 aaPredicted RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 ATF2P15336 505 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 CDKN1AP38936 164 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 GPR4P46093 362 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 FLT3LGP49771 235 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 MMP16P51512 607 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 CDH8P55286 799 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 PTP4A2Q12974 167 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 SNTB2Q13425 540 aaKnown RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 LAPTM4AQ15012 233 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 NADK2Q4G0N4 442 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 THEM4Q5T1C6 240 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 UBAP2Q5T6F2 1119 aaKnown RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 INO80CQ6PI98 192 aaPredicted RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 LRFN4Q6PJG9 635 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 RBM43Q6ZSC3 357 aaKnown RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 MIB1Q86YT6 1006 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 SERPINA12Q8IW75 414 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 ADGRF2Q8IZF7 708 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 FAM185AQ8N0U4 392 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 L3MBTL4Q8NA19 623 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 IQUBQ8NA54 791 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 NHLRC2Q8NBF2 726 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 MCPH1Q8NEM0 835 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 OR2I1PQ8NGU4 316 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 ZNF461Q8TAF7 563 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 DCAF4Q8WV16 495 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 EDAQ92838 391 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 HAUS8Q9BT25 410 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 TPPP3Q9BW30 176 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 SMG9Q9H0W8 520 aaKnown RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 NKX2-4Q9H2Z4 354 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 PCDH18Q9HCL0 1135 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 TDP1Q9NUW8 608 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 TMEFF2Q9UIK5 374 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms