RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 FAM45AQ8TCE6 357 aa13.19□□□□□ -0.3
USB1-207ENST00000563149 SLC25A23Q9BV35 468 aa13.19□□□□□ -0.3
USB1-207ENST00000563149 SIK2Q9H0K1 926 aa13.19□□□□□ -0.3
USB1-207ENST00000563149 ACSS2Q9NR19 701 aa13.19□□□□□ -0.3
USB1-207ENST00000563149 ADA2Q9NZK5 511 aa13.19□□□□□ -0.3
USB1-207ENST00000563149 DMTF1Q9Y222 760 aa13.19□□□□□ -0.3
USB1-207ENST00000563149 TIMM13Q9Y5L4 95 aaPredicted RBP13.19□□□□□ -0.3
USB1-207ENST00000563149 ARHGAP10A1A4S6 786 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 A8MT66 165 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 KCNU1A8MYU2 1149 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 STX16-NPEPL1H3BU86 382 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 M0QZ92 97 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 RNASEH2AO75792 299 aaKnown RBP13.18□□□□□ -0.3
USB1-207ENST00000563149 PGM3O95394 542 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 HLA-DQB2P05538 268 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 SNRPB2P08579 225 aaKnown RBP13.18□□□□□ -0.3
USB1-207ENST00000563149 MYL3P08590 195 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 ZNF26P17031 533 aaPredicted RBP13.18□□□□□ -0.3
USB1-207ENST00000563149 IGFBP6P24592 240 aaPredicted RBP13.18□□□□□ -0.3
USB1-207ENST00000563149 ACADVLP49748 655 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 NR1H2P55055 460 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 TXNL4AP83876 142 aaKnown RBP13.18□□□□□ -0.3
USB1-207ENST00000563149 MYBPC1Q00872 1141 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 PDAP1Q13442 181 aaKnown RBP13.18□□□□□ -0.3
USB1-207ENST00000563149 APOFQ13790 326 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 FASTKQ14296 549 aaKnown RBP13.18□□□□□ -0.3
USB1-207ENST00000563149 CSHL1Q14406 222 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 MAPRE1Q15691 268 aaKnown RBP13.18□□□□□ -0.3
USB1-207ENST00000563149 MGAT5BQ3V5L5 792 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.18□□□□□ -0.3
USB1-207ENST00000563149 TMEM259Q4ZIN3 620 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 REP15Q6BDI9 236 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 CTU1Q7Z7A3 348 aaKnown RBP13.18□□□□□ -0.3
USB1-207ENST00000563149 CUZD1Q86UP6 607 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 MARK4Q96L34 752 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 ZNF597Q96LX8 424 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 CNBD2Q96M20 576 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 UHRF1Q96T88 793 aaPredicted RBP13.18□□□□□ -0.3
USB1-207ENST00000563149 EFHD1Q9BUP0 239 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 OSBPL11Q9BXB4 747 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 SLC25A51Q9H1U9 297 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 TRPC7Q9HCX4 862 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 OSER1Q9NX31 292 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 CACNA2D2Q9NY47 1150 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 SLC2A6Q9UGQ3 507 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 IPO11Q9UI26 975 aaKnown RBP13.18□□□□□ -0.3
USB1-207ENST00000563149 DSEQ9UL01 958 aa13.18□□□□□ -0.3
USB1-207ENST00000563149 NUP205Q92621 2012 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 TCRBV3S1A0A5B6 114 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 TMEM233B4DJY2 109 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 TNPO2O14787 897 aaKnown RBP13.17□□□□□ -0.3
USB1-207ENST00000563149 VILLO15195 856 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 PAGE1O75459 146 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 STAMBPO95630 424 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 ZNF865P0CJ78 1059 aaPredicted RBP13.17□□□□□ -0.3
USB1-207ENST00000563149 PSMC3P17980 439 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 IMPDH1P20839 514 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 BDNFP23560 247 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 SLC7A1P30825 629 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 EPHX2P34913 555 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 RPS6KA3P51812 740 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 PGGT1BP53609 377 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 TIGD5Q53EQ6 642 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 SAMD4BQ5PRF9 694 aaKnown RBP13.17□□□□□ -0.3
USB1-207ENST00000563149 IL23RQ5VWK5 629 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 KDELC1Q6UW63 502 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 RBM44Q6ZP01 1051 aaKnown RBP13.17□□□□□ -0.3
USB1-207ENST00000563149 RNF148Q8N7C7 305 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 RTL3Q8N8U3 475 aaKnown RBP13.17□□□□□ -0.3
USB1-207ENST00000563149 PPP1R13LQ8WUF5 828 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 BRI3BPQ8WY22 251 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 UBXN10Q96LJ8 280 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 ASB2Q96Q27 587 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 GAD1Q99259 594 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 PARK7Q99497 189 aaKnown RBP13.17□□□□□ -0.3
USB1-207ENST00000563149 RTP3Q9BQQ7 232 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 RHOBTB2Q9BYZ6 727 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 AP5M1Q9H0R1 490 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 SMOC2Q9H3U7 446 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 ATP13A1Q9HD20 1204 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 SPAG4Q9NPE6 437 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 VPS45Q9NRW7 570 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 MIOSQ9NXC5 875 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 CD300AQ9UGN4 299 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 CROTQ9UKG9 612 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 TRPV2Q9Y5S1 764 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 E7ENX8 843 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 SLC7A4O43246 635 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 PMPCBO75439 489 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 SRP72O76094 671 aaKnown RBP13.17□□□□□ -0.3
USB1-207ENST00000563149 HSPA8P11142 646 aaKnown RBP13.17□□□□□ -0.3
USB1-207ENST00000563149 HNRNPLP14866 589 aaKnown RBP eCLIP13.17□□□□□ -0.3
USB1-207ENST00000563149 MSX2P35548 267 aaPredicted RBP13.17□□□□□ -0.3
USB1-207ENST00000563149 WNT3AP56704 352 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 MRPS6P82932 125 aaKnown RBP13.17□□□□□ -0.3
USB1-207ENST00000563149 SEPT6Q14141 434 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 UPP1Q16831 310 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 NADK2Q4G0N4 442 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 AGKQ53H12 422 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 C8orf82Q6P1X6 216 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms